| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1980 |
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| Symbol | |
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| ID | 5662374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2404254 |
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| End bp | 2405138 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236577 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_001501837 |
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| Protein GI | 157961803 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000108388 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATACG GAAGCATCGT TGCCTTAGTC ACGCCAATGA ATAGTGACGG CACAGTTGAT
TATAAAAGTC TTGAAAGTTT AGTTGAGTAC CATATCGCCC AAGGTACAGA TGCCATCGTT
GCTGTAGGCA CAACTGGTGA ATCAGCTACA TTACCAGCTA AAGAACATAT TGCTGTTGTT
GAGCAAACGG TAAAGTTTGC TGCGGGCAGA ATTCCAATTA TTGGTGGTAA TGGTGCAAAT
GCCACCGCCG AAGCAGTCGA GTTAACTAAA GGTCTATCTA ATGTCGGTGT AGCTGCCATG
TTAGGTGTGA CACCTTATTA CAATAAGCCA ACGCCAAAGG GGCTTATTGC ACATTATACT
GCGGTTGCGG CCAGTACCGA TGTACCGCAA ATCCTTTATA ACGTTCCTGG CAGAACCGCT
GTCGATATGC GCCCTGAAAC CGTCGCTCAG CTTGTTGGTA TTAAAAACAT CATAGGTGTT
AAAGAGGCTA CGGGTGATCT TTCCCGCGTA AAAGAGCTAC GTAACCTATG TGGTGACGAC
TTCCTTCTTT ATAGCGGTGA TGATGCGACT GCAAGAGAGT TTCTCTCATT AGGTGGTAAT
GGCGTTATTT CTGTAGCGAA CAATATCGTA CCAAAACAGT TTAAAGCCAT GTGCGATGCG
GCTCTTAGCG GGGATGTCTC TGCGGCACTT TCGGCTGAAG AGTCAATTAA AGAGTTGTTT
AGTGTCTTGT TTTGCGAAGC TAACCCAATC CCTGTAAAAT GGGCCGTCCA TCGTATGGGA
CTGATTAGCA ACGGAACAAT TCGTTTACCT TTGACTGAAC TTTCTACCGA GTTTCATGGT
CTGTTGCTAG AAGCGATGAA AAATGCCCGA ATAGAGGTTA AATAA
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| Protein sequence | MIYGSIVALV TPMNSDGTVD YKSLESLVEY HIAQGTDAIV AVGTTGESAT LPAKEHIAVV
EQTVKFAAGR IPIIGGNGAN ATAEAVELTK GLSNVGVAAM LGVTPYYNKP TPKGLIAHYT
AVAASTDVPQ ILYNVPGRTA VDMRPETVAQ LVGIKNIIGV KEATGDLSRV KELRNLCGDD
FLLYSGDDAT AREFLSLGGN GVISVANNIV PKQFKAMCDA ALSGDVSAAL SAEESIKELF
SVLFCEANPI PVKWAVHRMG LISNGTIRLP LTELSTEFHG LLLEAMKNAR IEVK
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