Gene Spea_1968 details

Gene Information

• Locus tag: Spea_1968
• ID: 5662362
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: -
• Start bp: 2393609
• End bp: 2395546
• Gene Length: 1938 bp
• Protein Length: 645 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641236565
• Product: hypothetical protein
• Protein accession: YP_001501825
• Protein GI: 157961791

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00352196
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCGTT CCTTATGCTG CATATTGATT AGTGCAATGG GGCTTACTGC ATGCGGTGGT 
AGTAGTGACA GCTCGACTGA AAGCCCTGGT GACATCACTC CTCCACCAGT TGTACCTGAT 
GGTTTAGTCC GCTGTGACAC ACAATTCCAG CTTGATCAAA CCACAACCAC TTCTGGCCTT 
GTGTTTCTTA CTGAACCTAA CTATAAATCC GGTCAGCCCG CTGCAATCAT TGCAACACTC 
CAAGGAAAGC ATGTCACTGA ATATCAATTT AACTGGACTC AGACTGCTGG TTCAAAGCTC 
ATTTTAAAAA GCAGCAAAAG CCCTGTTTTA GCATTTACAG CACACGATAC AGGAAGCTAC 
AAATTCGAAG TGACAGCTGT GGGCAGGCAG TCATCTTTTA CACAATCAAT TGAAATAAAT 
GTTGAGGCTG GTAGTGATGT TCAAGTTTCT ACACGTGTGG ATCATCAGGT AACAGAAGGC 
AACTCGGTTA GCTTTAGAGT CGACACACCA GAAACTAACC CCCTTTCACA GATAAGCTGG 
TGTATTGCTG GCGGCCCAGC TCTTAATGTT GACATAAGTG CCCCAGAGAA AGCGTTATTC 
ACCGCGCCTA ATGTCGATGA AGACACGCTA TCCACCCTCA GGGTTTCTGC GGTTATTAAC 
GGTCAATCCG TGACAGATGA TGTACATCTA CTCATCACAA AAGAAGGTAG CATCACTTCA 
CAATATTTTG ATGAAAGAGT GGCTAAAACC TTTGCCTATA ACCTCAGTTC GCCCTACAAA 
GATGACTTAC AGCCATGTGT CTATTCCAAT CAACTTCAAC AAAGTTGCAC TATATCCCGT 
CTGCCGCTAA TCGGTCAGTT GGGGGGGATA AACAAGCAGG CGATATTAGA CAGACTCTTA 
GTCTCTCATC ATTGGATGGG AGAGAATTTC GAATACTTCC TTGAGAATTT AGATCCAAAC 
AGCGATTTTG CCACCCTTTT ACAGTCTGTC ACTGCCATTG TAATTAGCTA TGATGTACGT 
CCCTCATTTT ACTGGGTTGT GACAGGCGCT ATTTACTTAG ATCCGAATGA TCTTTGGTTA 
CTTGCTGAAG AGCGTGACAC CATAAATGAA GCACCTGATT ACCGCAGTAG TTTTGGTAAT 
GATTTAAACT TCTTAATGCC TTGGCGATAT GTAAAGGACA ATAATTACAC TTCCTATGTT 
GTACCAAGAA GTGTACGTGC AGATCGAACA GCAGAGGAAA TGATGCCTGA CTTAGCCTCA 
CTTCTCTATC ATGAACTGGC ACACGCAAAT GACTTTTTCC CAAGGAGCGT ACACACAAGC 
TTATCAGGCC CCACTCTACT CGATGACTAT TTTCGTCGCA GCGATGCCAA ACAGCTCGTT 
TCCGATCAAC TTACGGCTTC CTACCCATTA AATAGTCAGG AAATGGCTAA TTTAGCAGAG 
GTTAGTTTTA AAGGTGCGAC GGCTAATGGA ACCCAAAAGG CATACAATGC CGCCGATATC 
AGTAGTTTCT TTTCTCCTGA TCGAGCCTCG GACTATTATG CCTACTCCAC GACACGAGAA 
GATGCTGCAA TGTTATTTGA AGAAGCCTTG ATGAGTCACA GATATTCAAT TCAACGGGAT 
GTCGCGGTTA CCGATAAACC TGAAAACCCA ACTGGTAGCA CTATTAACGT GGACTGGGGA 
CAACGGGGCC GTATTGGCGA TGCTAGTTTA GAGAGTCGAG CCGCATTTGT CATCAACCAG 
ATGATGCCAG AGCTTAACGG CGCTGCGCTA GTCAATGGCT TACCAGAACC TATAGCAATG 
AAACAAGGGC TGTCTTGGTC TGAAAACTTA ATGTTGTCCC CGTCGACCCA ATCACAATTG 
AATCGAACCT CAGCTAGCGC TACTTTTACT CCAGAGATCC GCTTAAGTGG TGATAGACAT 
GTTAAACCCG TAGATTAA 

 

Protein sequence

MKRSLCCILI SAMGLTACGG SSDSSTESPG DITPPPVVPD GLVRCDTQFQ LDQTTTTSGL 
VFLTEPNYKS GQPAAIIATL QGKHVTEYQF NWTQTAGSKL ILKSSKSPVL AFTAHDTGSY 
KFEVTAVGRQ SSFTQSIEIN VEAGSDVQVS TRVDHQVTEG NSVSFRVDTP ETNPLSQISW 
CIAGGPALNV DISAPEKALF TAPNVDEDTL STLRVSAVIN GQSVTDDVHL LITKEGSITS 
QYFDERVAKT FAYNLSSPYK DDLQPCVYSN QLQQSCTISR LPLIGQLGGI NKQAILDRLL 
VSHHWMGENF EYFLENLDPN SDFATLLQSV TAIVISYDVR PSFYWVVTGA IYLDPNDLWL 
LAEERDTINE APDYRSSFGN DLNFLMPWRY VKDNNYTSYV VPRSVRADRT AEEMMPDLAS 
LLYHELAHAN DFFPRSVHTS LSGPTLLDDY FRRSDAKQLV SDQLTASYPL NSQEMANLAE 
VSFKGATANG TQKAYNAADI SSFFSPDRAS DYYAYSTTRE DAAMLFEEAL MSHRYSIQRD 
VAVTDKPENP TGSTINVDWG QRGRIGDASL ESRAAFVINQ MMPELNGAAL VNGLPEPIAM 
KQGLSWSENL MLSPSTQSQL NRTSASATFT PEIRLSGDRH VKPVD