Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1965 |
Symbol | |
ID | 5662359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2390178 |
End bp | 2391434 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236562 |
Product | uracil-xanthine permease |
Protein accession | YP_001501822 |
Protein GI | 157961788 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2233] Xanthine/uracil permeases |
TIGRFAM ID | [TIGR00801] uracil-xanthine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.121329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACC TAACAATGCC TTTGCAGGGA GCGCAAATGC TGTTTGTCGC CTTTGGTTCC TTAGTATTGA TGCCTTTACT GACAGGCTTA GATACCAACG TTGCACTATT TACCGCTGGC ATAGGTACCC TAATATTCCA ATTGATCACT AAACGTCAAA TCCCAATCTT TTTAGCGTCC TCTTTCGCTT TCATCGCGCC GATTATGTAC GGCGTACAAA CTTGGGGAAT TCCATCTACC ATGGGTGGCT TAATGGCTGC TGGTATTGTT TATGTAATTT TAGCTTCAGT AGTTAAAGTC AGAGGTGGTG GATTCATAAA GCGCTTACTG CCTCCAGTTG TCGTAGGCCC CGTCATTATT GTTATTGGTT TAGGCTTAGC GCCTGTCGCC GTTAACATGG CAGTCGGCAA GAGTGGCGAT GGTGGCCTGG TTCTTGTTGA ACAAAATGTG GCACTCTTTA TATCACTAGC CTCACTTTTC ACTACTATAG CCGTAGCCAT TTTCGCTAAA GGAATACTGA GGTTGATGCC AATTCTTGCT GGTATTTCTG TCGGTTACGG ATTAAGTCTC GCGTATGGTA TTGTTGACTT TACCCCAGTA AGAGACGCGG CTTGGTTGGC GATGCCAAAC TTCGTAGCTC CAGAGTTTAA CTGGCATGCC ATTCTATTTA TGATCCCTGT CGCAATAGCA CCGGCAGTCG AGCACATTGG CGATATTCTC GCTATCTCTA ACGTAACAGG AAAAGATTAT CTTAAAAAAC CAGGATTACA CCGCACTCTA GCGGGTGACG GCGTTGCGAC GATTGCAGCT TCAGCGTTCG GTGGACCACC TAATACAACG TATAGTGAAG TCACCGGAGC CGTCACTCTG ACCAAGAACT TTAACCCTGT AGTCATGACT TGGACGGCGA TTACAGCCAT CCTATTCTCT TTCGTTGGTA AGCTTGGCGC GCTACTACAA ACCATTCCTG TACCTGTTAT GGGGGGTATC ATGTGCCTAC TGTTTGGTTC GATTGCAGCT GTAGGTCTTA ATTCTTTAAT TAAGAACAAT GTTGACATGA ATGAGCCACG AAACTTAAGT ATTGTGGGTG TCACATTGGT ATTCGGTATC GGTGGAATGG CATTCGGTAT CGGTTCATTC AGTCTAACGG GTATTAGCCT ATGCGGTATC CTAGCGATCG TAATGAACCT GTTGCTACCT GACAACGCCG CGTCACATGA AAAGATTATC AGTGAGAAAG TTAATCCTCC TTCATAA
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Protein sequence | MKNLTMPLQG AQMLFVAFGS LVLMPLLTGL DTNVALFTAG IGTLIFQLIT KRQIPIFLAS SFAFIAPIMY GVQTWGIPST MGGLMAAGIV YVILASVVKV RGGGFIKRLL PPVVVGPVII VIGLGLAPVA VNMAVGKSGD GGLVLVEQNV ALFISLASLF TTIAVAIFAK GILRLMPILA GISVGYGLSL AYGIVDFTPV RDAAWLAMPN FVAPEFNWHA ILFMIPVAIA PAVEHIGDIL AISNVTGKDY LKKPGLHRTL AGDGVATIAA SAFGGPPNTT YSEVTGAVTL TKNFNPVVMT WTAITAILFS FVGKLGALLQ TIPVPVMGGI MCLLFGSIAA VGLNSLIKNN VDMNEPRNLS IVGVTLVFGI GGMAFGIGSF SLTGISLCGI LAIVMNLLLP DNAASHEKII SEKVNPPS
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