Gene Spea_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1963 
Symbol 
ID5662357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2388916 
End bp2389500 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content43% 
IMG OID641236560 
Productsuperoxide dismutase 
Protein accessionYP_001501820 
Protein GI157961786 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.271229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTTG AATTACCAGC ATTACCTTAC GCAAAGAACG CACTTGAGCC ACACATCTCG 
GAAGAAACAA TTAACTTTCA TTACGGTAAG CACCACAACA CTTACGTTGT TAAGCTTAAC 
GGTTTAGTTG AAGGTACTGA ACTTGAGCAA AAGAGCCTAG AAGAGATTAT TAAAACCTCT 
ACTGGTGGTA TCTTTAACAA CGCAGCTCAA ATCTGGAATC ACACTTTCTA CTGGAACTGT 
CTATCACCAA ATGGTGGAGG TGAAGCAACT GGTCCTGTAG CAGAAGCTAT CATTGCTGCA 
TTTGGCTCAT TTGAAGCATT TAAGGCACAG TTCACTGATT CTGCAGTAAA CAACTTCGGT 
AGCGCTTGGA CATGGCTTGT CAAAAATGCA GACGGCACTG TCGCTATTGT TAATACTAGC 
AACGCTGCAA CACCTCTTAC AGATGAAGGC GTGACGCCAA TCATGACTGT TGACGTGTGG 
GAACACGCTT ACTACATCGA TTACCGTAAC GTACGCCCAG ACTATCTAGC TCACTTTTGG 
CAATTAGTTA ACTGGGATTT TGTGAATGCA AACTTCGCAG CTTAA
 
Protein sequence
MAFELPALPY AKNALEPHIS EETINFHYGK HHNTYVVKLN GLVEGTELEQ KSLEEIIKTS 
TGGIFNNAAQ IWNHTFYWNC LSPNGGGEAT GPVAEAIIAA FGSFEAFKAQ FTDSAVNNFG 
SAWTWLVKNA DGTVAIVNTS NAATPLTDEG VTPIMTVDVW EHAYYIDYRN VRPDYLAHFW 
QLVNWDFVNA NFAA