Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1957 |
Symbol | |
ID | 5662351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2381364 |
End bp | 2382719 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641236554 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_001501814 |
Protein GI | 157961780 |
COG category | [S] Function unknown |
COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.732042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTTT GTAGTCTGAT ATGCTACATA TGTTTGTGTT GTCTTAGTGT AGCAAGTAAC GCTAATGAGC GGCTTACACG TGCGCAAAGC ATGTTAAAGC AGCAGGTATC TCTGATGGCA CTCGTCCAAA GCGATGAGAA GTTTGACCAA TATAAGCAAT CGCTTACTCA ACATCAGCTA TCAGCAGCAG AGTTGTCGAG GATTGAGACT GATATCACCA CGTTTTGGCT CCAACGACAA ATCCCAATCC GAAGTCTAGA GTTAGCCAAT CAAAAAGATC CTTTGATAAG AGCCATGGCA ATCGAGCCTC AATTAGATGG ATATCTACAC CTTCAGAATC GTATTCGTCA TTTACAGTGG TTAGCCGAGC AGGATTGGTG GCAGGTAATT GAGAGTGAAC GCTTGATCCG CCCGGGAGAG AGTAATCCTA TTATTCCAGA TGTTGTGAGG CGTTTATGGC TTTTGGGAGA TGCGAGTAGT GCGGCAACAG GGTCGAATGA GTTGAACTTA CCTATTGTAG ATGCACTCAA ACGTTTTCAG TTACGTCACG GACTTAAGGC CGATGCGATA ATAGGGCCTG AAACGCTGAA ATGGTTAAAT GTTCCCCCTG AGCAGCGAGC CTCGATTCTG GCGAAAAACT TTATCCAACG GGCTGAGTTT ATGGCGCAAA GAGATGACCG CTTTCTGGTT ATAAACATAC CGGCTTTTGA GATGGAGCTG TTTGATCACG GTGAGCTGGA GCTAGCTTCT CGAGTGATAG TAGGAAAGCC TTATAGACCG ACGCCTATAC TCAGTAGTTC AATTTCTAAT GTGGTGATTA ATCCAAGTTG GCGAGTCCCT AAAAAAATCA TGTATAACGA TCTACTGCCA CAGGTGAGAA AAGATGGCAA TTATATCTCG CAACGTAACT TTGATGTGTT TGATCGTAAT AATAATCTAG TGATGCGAAC CGCTGAGCAG TGGAGCGATT TAGCTAAGGG GCCATTTCCT TTTAGGTTTG TGCAGAGACC TGGAACCAAT AATACTCTTG GGAGATATAA GTTTTACTTT CCAAATGATT TTAGTGTCTA TCTGCACGAT ACCTCTGATC CAAAATTGTT CCAGCGGAGT AATAGGGCTC TATCGTCAGG CTGCATTAGA ATTGAGAATG TACAAGGCTT AGCCAATTGG ATGGCCGCAA ATTTAGTAAA AGATAAGCAA ACATGGGTCG ATAGACACGC TGATAGAAAG CGTACTCAGT GGTTCGCTCT AAAATCGTCG CTTAATGTTC ATCTAGTGTA TTGGACTGCT TGGATCGATG GTTCTAACCA AGCACAGTAT AGAGATGACA TCTATCAATT GCAGGAAGGC AGTTAG
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Protein sequence | MRFCSLICYI CLCCLSVASN ANERLTRAQS MLKQQVSLMA LVQSDEKFDQ YKQSLTQHQL SAAELSRIET DITTFWLQRQ IPIRSLELAN QKDPLIRAMA IEPQLDGYLH LQNRIRHLQW LAEQDWWQVI ESERLIRPGE SNPIIPDVVR RLWLLGDASS AATGSNELNL PIVDALKRFQ LRHGLKADAI IGPETLKWLN VPPEQRASIL AKNFIQRAEF MAQRDDRFLV INIPAFEMEL FDHGELELAS RVIVGKPYRP TPILSSSISN VVINPSWRVP KKIMYNDLLP QVRKDGNYIS QRNFDVFDRN NNLVMRTAEQ WSDLAKGPFP FRFVQRPGTN NTLGRYKFYF PNDFSVYLHD TSDPKLFQRS NRALSSGCIR IENVQGLANW MAANLVKDKQ TWVDRHADRK RTQWFALKSS LNVHLVYWTA WIDGSNQAQY RDDIYQLQEG S
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