Gene Spea_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1957 
Symbol 
ID5662351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2381364 
End bp2382719 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content44% 
IMG OID641236554 
Productpeptidoglycan binding domain-containing protein 
Protein accessionYP_001501814 
Protein GI157961780 
COG category[S] Function unknown 
COG ID[COG2989] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.732042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTTT GTAGTCTGAT ATGCTACATA TGTTTGTGTT GTCTTAGTGT AGCAAGTAAC 
GCTAATGAGC GGCTTACACG TGCGCAAAGC ATGTTAAAGC AGCAGGTATC TCTGATGGCA
CTCGTCCAAA GCGATGAGAA GTTTGACCAA TATAAGCAAT CGCTTACTCA ACATCAGCTA
TCAGCAGCAG AGTTGTCGAG GATTGAGACT GATATCACCA CGTTTTGGCT CCAACGACAA
ATCCCAATCC GAAGTCTAGA GTTAGCCAAT CAAAAAGATC CTTTGATAAG AGCCATGGCA
ATCGAGCCTC AATTAGATGG ATATCTACAC CTTCAGAATC GTATTCGTCA TTTACAGTGG
TTAGCCGAGC AGGATTGGTG GCAGGTAATT GAGAGTGAAC GCTTGATCCG CCCGGGAGAG
AGTAATCCTA TTATTCCAGA TGTTGTGAGG CGTTTATGGC TTTTGGGAGA TGCGAGTAGT
GCGGCAACAG GGTCGAATGA GTTGAACTTA CCTATTGTAG ATGCACTCAA ACGTTTTCAG
TTACGTCACG GACTTAAGGC CGATGCGATA ATAGGGCCTG AAACGCTGAA ATGGTTAAAT
GTTCCCCCTG AGCAGCGAGC CTCGATTCTG GCGAAAAACT TTATCCAACG GGCTGAGTTT
ATGGCGCAAA GAGATGACCG CTTTCTGGTT ATAAACATAC CGGCTTTTGA GATGGAGCTG
TTTGATCACG GTGAGCTGGA GCTAGCTTCT CGAGTGATAG TAGGAAAGCC TTATAGACCG
ACGCCTATAC TCAGTAGTTC AATTTCTAAT GTGGTGATTA ATCCAAGTTG GCGAGTCCCT
AAAAAAATCA TGTATAACGA TCTACTGCCA CAGGTGAGAA AAGATGGCAA TTATATCTCG
CAACGTAACT TTGATGTGTT TGATCGTAAT AATAATCTAG TGATGCGAAC CGCTGAGCAG
TGGAGCGATT TAGCTAAGGG GCCATTTCCT TTTAGGTTTG TGCAGAGACC TGGAACCAAT
AATACTCTTG GGAGATATAA GTTTTACTTT CCAAATGATT TTAGTGTCTA TCTGCACGAT
ACCTCTGATC CAAAATTGTT CCAGCGGAGT AATAGGGCTC TATCGTCAGG CTGCATTAGA
ATTGAGAATG TACAAGGCTT AGCCAATTGG ATGGCCGCAA ATTTAGTAAA AGATAAGCAA
ACATGGGTCG ATAGACACGC TGATAGAAAG CGTACTCAGT GGTTCGCTCT AAAATCGTCG
CTTAATGTTC ATCTAGTGTA TTGGACTGCT TGGATCGATG GTTCTAACCA AGCACAGTAT
AGAGATGACA TCTATCAATT GCAGGAAGGC AGTTAG
 
Protein sequence
MRFCSLICYI CLCCLSVASN ANERLTRAQS MLKQQVSLMA LVQSDEKFDQ YKQSLTQHQL 
SAAELSRIET DITTFWLQRQ IPIRSLELAN QKDPLIRAMA IEPQLDGYLH LQNRIRHLQW
LAEQDWWQVI ESERLIRPGE SNPIIPDVVR RLWLLGDASS AATGSNELNL PIVDALKRFQ
LRHGLKADAI IGPETLKWLN VPPEQRASIL AKNFIQRAEF MAQRDDRFLV INIPAFEMEL
FDHGELELAS RVIVGKPYRP TPILSSSISN VVINPSWRVP KKIMYNDLLP QVRKDGNYIS
QRNFDVFDRN NNLVMRTAEQ WSDLAKGPFP FRFVQRPGTN NTLGRYKFYF PNDFSVYLHD
TSDPKLFQRS NRALSSGCIR IENVQGLANW MAANLVKDKQ TWVDRHADRK RTQWFALKSS
LNVHLVYWTA WIDGSNQAQY RDDIYQLQEG S