| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1956 |
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| Symbol | |
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| ID | 5664748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2380631 |
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| End bp | 2381200 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641236553 |
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| Product | hypothetical protein |
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| Protein accession | YP_001501813 |
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| Protein GI | 157961779 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0620526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTTC TTGCTAAAGG TTTTACTCTA ATTGAGCTTG TCGTGGTGAT TATTGTATTG
GGAATTTTAG CCGTCATTGC TGCGCCTAAG TTTATCAATT TAAGTCAAGA TGCACATGAC
GCCACGATTA AGAGTGCGTT TGGAAGCTTT ACTTCTGGGG TAAAACTTTA CCACAGTTGC
TGGCTCACCT CTGGTAAGAC TGGTTATCAA GTGGATTTAG CCTGCTATGG TGATGGCATG
CTAGATTCGT CAGTGACAGG ATACCCATTG GGGATAGATA CTTCACAGAG TGATAATGGC
ACAAGGCTAC AAGGTGCCTA TTGCAAAGAG ATTTGGCAAG GCTTGCTAGA TAACGACGAA
TATACTCTAG AAAGCCATGG TAATAATACC TTCGACAAGG GCGATGACAT CATTTATTGG
TATTCTGGTG GGCCATTGAG TGACGCTAAT ACTTACTGTT ATTATAACTA TATTGCAGAT
GATCGCTCTC AAGGGGCTAA AAACTGGGAG CTGAAGTATT ACCCAGAATC AGGCAAAACA
GTAGTAGGTC GAAGTGTGCT GAGCATTTAA
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| Protein sequence | MKVLAKGFTL IELVVVIIVL GILAVIAAPK FINLSQDAHD ATIKSAFGSF TSGVKLYHSC
WLTSGKTGYQ VDLACYGDGM LDSSVTGYPL GIDTSQSDNG TRLQGAYCKE IWQGLLDNDE
YTLESHGNNT FDKGDDIIYW YSGGPLSDAN TYCYYNYIAD DRSQGAKNWE LKYYPESGKT
VVGRSVLSI
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