| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1949 |
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| Symbol | |
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| ID | 5662343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2371305 |
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| End bp | 2373161 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641236542 |
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| Product | hypothetical protein |
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| Protein accession | YP_001501806 |
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| Protein GI | 157961772 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000191587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTA AGTTGGATAA AACCCTATCG TTAGTAGCCG TTGGCGTATT GAGTGTACTG
CAAGGTGTGC AAGCTGCACC TGTTTATGAA ATTATTAACA TCGACCTAGA TACTTATAAT
CTAAATGGCA CCATTGATAA TACCCGTAAC GGTTATGGTA TGGCAGTTAA TGCTAATAAT
GAGGCGGTTG GTGCCGCTAA AGGTAAAAAG AAGCTAACTG TGTCAGAAGA TGATGATGGT
GTCATCGACA TTGAAGACGG GGTTGCAGAC TCTGAAACGA TTAACTACTC GGTTAATCTT
CCTATCATAG CTAACAACTT CACTTTTAAT TCAGTTGGTA ACGAGTGGAT GCCAACTTTT
GAAAGCGTTA ATGGCACTAC CGCACCGACG TTCCCCGAAG ATGAATCGAC AGTGAATTCG
GTCGATACCT TCTTCTACGA TATTAATGAC ACTGGCTTAA AAGTTGGCGC TATGACTGCG
CCACAGCAGA CAATTGATTA TGATGGCAGC AGCGATACTC AAGAGTTTTG GTATTACCGT
GAATATGAGC AGCGTGGTTT CGTTAAATCT GGCACTGACA AAGAAATCCC GTTAGTTCCT
CCTTTTACAA AGTATATCTA TAAGGAAGGA GAGGCTGAGG AGCAAACCAT CACTGTCGGT
GGTTTCTCTA GTGCTGCGGC GGTTAATGCT GGTGGTTTAG TTGCTGGTTA TGCCAGTACT
GAACTTAGTG ATAATAGCGC CAATATTGTT AAATCCTGTG TCGACGATAA TAGTGACACC
GCGCCGCAAC AGATCTGTAT TCAGGCGGCT CAGTTCCCAA ATCAATATGG CTATAGTGAT
ATCCAGTATC AGATCCGTGG TTATGTTTGG CAATATGAAT CGGGAAGTGA AACACTAACT
GCGACTATGT TGCCATTAGG CCTAGAAGTC ACTAATGATA GTGTATACAG CGCCCAGGGT
CTTGGGATCA ACGATGACGG TGTCGTAGCG GGCCGCTCTT ATGTTTATCG TAAAAATGAT
AAAGACAGAT TGTATTATGA TGCTGCTTAC TGGACTAAAG ATACTAATGG CGAGTACAAG
TATAACTGGG TCGATGTCGA TCAAGTAAAA GATGTTTACT CATCAATTGC TTACGATATT
AACAACGAAG GAATTTTAGT CGGTAGTTAT CACAAGTACA TCGATGGCTA TCTTCGAGAT
AAGTTCTTTT ATTATAATAC CAATACTGAT GAACTTGTTA CGCCAAACGA CTTTTATAAC
AATATCTCCG ATTTAAGTAG CCGTGGCCGT GATATCAACA ACAAAGGCCA GGTTGTGGGT
TATATTGAAA CGACTCACGA TAAAGAGAAA CCACGTCCTA AAGCGGCTTT CTTGTACGAC
CAACCAACTG GTGAGTTTAA TAACGTTAAT GATTTACTAA CTTGTGAGTC TAAAGGTTAT
AAGAAAAATG CTGAGGGAAA ATGGGAGCGT AACTTAGTCG AGGTCAAAGA TGGCTCGGGT
AAAACGTTAA CCTATAAGAG TGAGATCCTT GTCGTAGAAG GTAATAGTAT CAATGAAGAT
GGTACTATTG TCGGAACTGC GTTTATTCGT AAGCCTTCTT ATAAGTTTGA TGATGATGGT
AACTTGGTAA TTGGTGATAA TGGTTTGCCA TTCTTTGAGC TTAACGGCTA CGGCGATCCG
GTTACTTCAT TCTTACCACG AATGGTTGTT CTACAACCTA ATACCACCTC TGGTGCAGAA
TCATGTACCG TCATCGATGA TGATGGCAGT AACGACAACT ATGAGCGTAA GGGAGCGGCA
AGTTTTGCAT GGTTATTAGC GTTGCCATTG CTATGGTTTA GACGCCGAGT TAAGTAA
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| Protein sequence | MKFKLDKTLS LVAVGVLSVL QGVQAAPVYE IINIDLDTYN LNGTIDNTRN GYGMAVNANN
EAVGAAKGKK KLTVSEDDDG VIDIEDGVAD SETINYSVNL PIIANNFTFN SVGNEWMPTF
ESVNGTTAPT FPEDESTVNS VDTFFYDIND TGLKVGAMTA PQQTIDYDGS SDTQEFWYYR
EYEQRGFVKS GTDKEIPLVP PFTKYIYKEG EAEEQTITVG GFSSAAAVNA GGLVAGYAST
ELSDNSANIV KSCVDDNSDT APQQICIQAA QFPNQYGYSD IQYQIRGYVW QYESGSETLT
ATMLPLGLEV TNDSVYSAQG LGINDDGVVA GRSYVYRKND KDRLYYDAAY WTKDTNGEYK
YNWVDVDQVK DVYSSIAYDI NNEGILVGSY HKYIDGYLRD KFFYYNTNTD ELVTPNDFYN
NISDLSSRGR DINNKGQVVG YIETTHDKEK PRPKAAFLYD QPTGEFNNVN DLLTCESKGY
KKNAEGKWER NLVEVKDGSG KTLTYKSEIL VVEGNSINED GTIVGTAFIR KPSYKFDDDG
NLVIGDNGLP FFELNGYGDP VTSFLPRMVV LQPNTTSGAE SCTVIDDDGS NDNYERKGAA
SFAWLLALPL LWFRRRVK
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