| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1946 |
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| Symbol | rlmL |
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| ID | 5664744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2366975 |
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| End bp | 2369110 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641236539 |
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| Product | 23S rRNA m(2)G2445 methyltransferase |
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| Protein accession | YP_001501803 |
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| Protein GI | 157961769 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.478167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAATT TTTTTGCTGC AGCTCCGCGG GGCTATGAAT ACGCGTTATC ACTTGAGCTA
GCCGAGCTAG GCGCTTCTGA AATTAAAGAA AGTGTTGCCG GGGTTTATTT TTCCGCTCCG
TTGGAGCTTG GATATCGTAT AACGCTGTGG TCGCGTTTAG CGAGCAGAAT CATTTTTGTC
ATTTACAAGG GACCTTGTGA ATCTCCTGAG CAACTGTATA ACGCAGCCTA TGGTATTGAC
TGGCAGATGC AGTTTTCGAA CCGCAGTACA TTTAGCATCG ATTTCCACGG TCTAGGTGGC
TTCATAAAGA ACACCCAATT TGGTGCGTTA AAAATCAAAG ATGCGATTGT TGATCGTTTT
AGAGATGATG ACTTTTCTCG TCCAAATGTT GAGAGAGTGG ATGCAGATTT TAGAATCGAT
GCGCACTTTA GACGTGGCGA GATCACTATT GGTATCAATT TCTCTGGCCC AGCACTGCAT
AAGCGTGGTT ATCGCTCTAC AACGGGTGAG GCGCCACTAA AAGAAAACTT AGCAGCTAAT
ATGCTTGTTC GTAGTGGTTG GCAGGCTGAT AAAGTTGATT TGCTTGATCC TTTCTGTGGT
AGCGGAACTA TTTTGATTGA AGCGGCCATG ATGGCTTGTG ATATCGCGCC AGGTATTCAC
CGTGAACGCT TTGGTTTTGA CCATTGGTTA CCTCACAACA AGAAAGTATG GCAAGAGCTA
TTAAATGAGG CTCAAGCCCG TGCATCTATC GGTAAAACCC GTTGCGAAAT TAAGTTCTTT
GGCTCAGATA TTGACTCTCG CTTAGTTGCG TTAGCAAAGC GTAATGCAGA AAATGCGGGC
GTACTTGAGT TGATTGACTT CAGCGTTGGC AATGCATTAA CTATTGATGT GCCGGTAGAG
TCTGGCTTCT TGATCTCTAA CCCGCCATAC GGTGAGCGCT TAGGCAACGT AACCTCATTG
TTGCAACTGT ATTATCAGTT AGGTGATAAG TTTAAGGCTG AGTTTGGTGG TTGGAGTATT
GCTATTTTAA ATAGTGATAT TGAACTGTTA TCAGCATTGA AACTAAAAGC TGACAAGCAG
ATGAAGATGA ATAACGGTGC ACTTGAGTGT GCGTTTAACC TTTATACGGT TCATGCTGAA
AATACACGCC GCGTCGATCC AGCAAATATC AAAATTGAAG GCGATGTCAG CGATATCGCC
GTGCCGTTTG CTAACCGTAT TAAAAAGAAC TTTAAACAGT TAGAAAAGTG GGCTAAGAAA
GAGGGCATCG ATAGTTACCG ACTATATGAT GCCGACTTAC CGGAATACAA TGTGGCAGTA
GATAAGTATC TTGATTACGT TGTGATTCAA GAGTACTCCG CGCCATCGCA AATTCCAGAA
GCAGTGACTA AGCGTCGTCT TACAGACGTT CTAATTTCTT TACCTAGCGC AATTGGTATA
GACCCGAACC ATATTATTTT GAAAACCCGT GAACGCAAGA AGGGTACCAA TCAGTATGAG
AAGTTAGTTG CCAACAAACT TGAACTTATT ACCACGGAAT ACGGTGCTAA GTTTAAGTTA
AACCTAAAAG AATACTTAGA TACTGGACTG TTTCTCGATC ACCGTTTAAC ACGTAAGCTT
GTTGGTGAAA AATCAAAAGG TCGAAGTGTT TGTAATCTAT TCTCTTATAC GGGTTCTGCG
TCAGTACATG CAGCACTTGG TGGGGCGACT TCAGTAACAA CTGTTGATAT GTCAAATACT
TATATCGATT GGGCAAAAGA AAACTTTGCA TTAAATGGCT TAAATAGCGA TAAGTATCAG
TTCGTTCAAG CTAACTGCCT ACAGTGGATG AAAAGGACTC ATGATAGATT TGACCTTATT
TTCATCGATC CACCGACTTT CTCTAACTCA AAGCGTATGG AAGACTCGTT TGACGTAGAA
CGCGATCATG TCGCTATGTT AAGTGATGTG TTTAAGCTGC TAAATCCTGG CGGAGAAATC
ATTTTCTCTA ACAACAAACG TAAATTCAAG ATGGAAATTG CGGCTTTGGA AGCACAAGGT
ATGTCGATTA AAAACATCGA TAACCAAACA CTGCCACTGG ATTTCAAGCG CAACCCTCAC
ATACATAATA CTTGGTTAAT TACCCATGCA GGCTAA
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| Protein sequence | MLNFFAAAPR GYEYALSLEL AELGASEIKE SVAGVYFSAP LELGYRITLW SRLASRIIFV
IYKGPCESPE QLYNAAYGID WQMQFSNRST FSIDFHGLGG FIKNTQFGAL KIKDAIVDRF
RDDDFSRPNV ERVDADFRID AHFRRGEITI GINFSGPALH KRGYRSTTGE APLKENLAAN
MLVRSGWQAD KVDLLDPFCG SGTILIEAAM MACDIAPGIH RERFGFDHWL PHNKKVWQEL
LNEAQARASI GKTRCEIKFF GSDIDSRLVA LAKRNAENAG VLELIDFSVG NALTIDVPVE
SGFLISNPPY GERLGNVTSL LQLYYQLGDK FKAEFGGWSI AILNSDIELL SALKLKADKQ
MKMNNGALEC AFNLYTVHAE NTRRVDPANI KIEGDVSDIA VPFANRIKKN FKQLEKWAKK
EGIDSYRLYD ADLPEYNVAV DKYLDYVVIQ EYSAPSQIPE AVTKRRLTDV LISLPSAIGI
DPNHIILKTR ERKKGTNQYE KLVANKLELI TTEYGAKFKL NLKEYLDTGL FLDHRLTRKL
VGEKSKGRSV CNLFSYTGSA SVHAALGGAT SVTTVDMSNT YIDWAKENFA LNGLNSDKYQ
FVQANCLQWM KRTHDRFDLI FIDPPTFSNS KRMEDSFDVE RDHVAMLSDV FKLLNPGGEI
IFSNNKRKFK MEIAALEAQG MSIKNIDNQT LPLDFKRNPH IHNTWLITHA G
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