Gene Spea_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1944 
Symbol 
ID5662338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2364247 
End bp2364786 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content39% 
IMG OID641236533 
Producthypothetical protein 
Protein accessionYP_001501801 
Protein GI157961767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATTAA TGCCAAAAAG GGATTGGCAG TGGGGATATA GTGAAACGCA TGGAGTGTTA 
AGCGTTTCGT TAGGGGATGA CATGGAGTTT TTGTCGCCTT ATAAATTAAA GTCCTTAATA
CCTGATGCCA AAGAAACAAT GGAGTTTAGT GTTGAACACG CTAAGTTCTA TATAGACTTG
GTTGATCGTT TATCAAAAAC ACTTCCATTG AACGATGCAT TATTAGTTCA AATTGCATTA
AATGCTACTG CTGCTCATTT TCTATTAAAA CCTCAAATGC CGAAGTCATG GTTTTTTAGT
ACTTCACATC AATGTGTTTA TAGTGAAGTA GGCAAACTAT TTCAATTGAC GACAAGCGAG
CACACAGTTC TAGCAATGGT GATAGAGTCT GGATTACAAG CATCTTTAGT CATGATCATG
TCAGCAGAAT GCCGTTTAAC AGACACGAAA ACACTGGGTC AGTTTGAAAC GATAAAAGTT
ATGCATGACA GGTTGGCGCC ACTCACAACA TCGACCCAGC AGCAGATCTA CGCAGCATAA
 
Protein sequence
MLLMPKRDWQ WGYSETHGVL SVSLGDDMEF LSPYKLKSLI PDAKETMEFS VEHAKFYIDL 
VDRLSKTLPL NDALLVQIAL NATAAHFLLK PQMPKSWFFS TSHQCVYSEV GKLFQLTTSE
HTVLAMVIES GLQASLVMIM SAECRLTDTK TLGQFETIKV MHDRLAPLTT STQQQIYAA