Gene Spea_1938 details

Gene Information

• Locus tag: Spea_1938
• ID: 5662332
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 2351070
• End bp: 2353118
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641236527
• Product: hypothetical protein
• Protein accession: YP_001501795
• Protein GI: 157961761

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00596375
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGG TAAAAAAAGG CTTTAATAAG TCGACGCTCG CTTTGGGGAT AGTTGCGGCG 
CTCGGTTTTG GCATAACAAA CCAAGCTAAC GCAGTCTCAT TCAATTGGGG TGAAGTGGAA 
GGAACATTTG ACTCGACTTG GACTGCTGGT GCAAGTTGGC GTGTTGAAGG CAGAGATTGG 
GACAACCAAA TTGGTAAGGT AAACCACCCT CGTTTCGATT GGTCTGGCTA CTCGGCTTTT 
GGCGATACCA AGTACAGCTC AGCTGAGATC TGGGCACAAC CTGGATCTTA CTCGAGCAAT 
GGTGACCTAA GTAACTTGCT GTACTCTCAG GGGGACACCA CATCAGAGAT TGTTAAAGGT 
CTTCATGAGT TGTCATTGAA ATACCAAAAT TTTGGCCTGT TTGCACGTGG CATGTATTTC 
TATGATCGCA AACTCAACGA TGGTGATTTT GGTTTTAATG ACCCGTTAAC GGGACAAGAG 
TTTGACCCTT GCGCCGATAG CAAGGCATCG GAAGTCCAGT GTAAAGACAT CCGTTTATTG 
GATGCTTTTG TATATGCTGA TTTCGATTTT AACGATGGTG CTAATCCACT TTCTATCCGT 
GTCGGTAATC AGGTTGTCTC TTGGGGAGAA AGCACCTTGA TTGCACACGG TATAGGTGTA 
ATTAACCCCG TCGATTTGAA CATTCTTAAT GCCCCTGGTG CCGAACTGAA AGAAGCCTTT 
AGGCCGCAAG GTATGGTGTG GGCATCATTT GGCGTGACAG ATAATTTATC TGTTGAAGGT 
TTTTATCAAT ATGATTGGGA GCCGGTTTGG GTTCCAACTC CGGGGTCAAT TTTCTCAACT 
AATGATTTTG CCGGTTACGG TGGTTACAAC CAAAACGCAC AGTTAGGTTT TAACTCTAAT 
CCTGATATGA ATCTCGATTT CTTGCTATCT GAATATAATA CCCTTGTGGG TATGGTGGGG 
TCTGGGCAGG TTGATTCAGT CGATTTAGCT AGACTTGCAT TGGCTTATCC GACGAAAGCA 
ACTTTGGTTG AAGATCCTGC TTCTGCAAGT GATGACGGTC AATGGGGTGT AAAACTTGGT 
TATTATGCGC CTCAATTGGG CGAGACCGAG TTTGGTTTGT ATTACATGAA CTACCATAGT 
CGTCGTCCAC TAATCAGCGG TACTACGGCT AACTTTAACG AAGATGCAAT AGCCCGCGAT 
TTACAACGTC TTGGTGGTAA AGCGCAATCT GGCGAAGCCA TGACTCGCGA AGATATTTTA 
GCCTTAGAGA CATTCTCTAA AGCACAGATT GTTTACCCTG AAGATATTCA ATTGATGGGC 
TTTAGTTTTA ATACGTTAGT CGGTGACACA TCTGTTGCGG GGGAAATTGC CCATCGATTG 
GATGAACCAC TGCAGATTGA TGATGTTGAA TTACTCTTTG CCGCAATGCC GCAGCAACTC 
GCTAATGCGG GTTTAAACCC AGAATTTGAT GGAATTTCAC AAGTCGAAAA CTACGGTCCT 
GGCGAATATG CTGAAGGCTT TATTCGTTTA GATACCACTC AGGCTCAGAC AACCTTTACT 
CACCTATTTG GGCCTACATT AGGTACCGAT AACCTGACTA TGCTGGCTGA AGTCGGTGGT 
GTATGGATCC ACGATATGCC AAGTCATGAT GAGTTGAGAC TGAACGGTCC AGGCACTTCT 
CGTTCGGGCG GTAACCCTGA TATGCCAGGT ATTATCGAAG CCGTTCATAA CGGTCCAGAA 
ACCAACCCAT TCCCAACTGA TTTTGCGTGG GGATATCGTT TAGTAGCTAA AGCTGACTAC 
AACAACGTAT GGGGCGGTGT AAACATTGCA CCTCGAGTCA TTTTCTCCCA TGACGTTGAT 
GGTATTACAC CAGATCCAAT GTTCCTGTTT ACTGAAGGCA AGAAGTCAGT CGCTTTAGGC 
GTTAATTTCG ATTATCAGAG TCGTTGGGCC GCAGATCTCT CATACAATAC TTTCTTCGGT 
GGAGTAGGGA CAACCAATGC GATGGCTGAC CGAGATTACG TTTCGTTCAA CATTAAATAT 
TCAATCTAA 

 

Protein sequence

MKKVKKGFNK STLALGIVAA LGFGITNQAN AVSFNWGEVE GTFDSTWTAG ASWRVEGRDW 
DNQIGKVNHP RFDWSGYSAF GDTKYSSAEI WAQPGSYSSN GDLSNLLYSQ GDTTSEIVKG 
LHELSLKYQN FGLFARGMYF YDRKLNDGDF GFNDPLTGQE FDPCADSKAS EVQCKDIRLL 
DAFVYADFDF NDGANPLSIR VGNQVVSWGE STLIAHGIGV INPVDLNILN APGAELKEAF 
RPQGMVWASF GVTDNLSVEG FYQYDWEPVW VPTPGSIFST NDFAGYGGYN QNAQLGFNSN 
PDMNLDFLLS EYNTLVGMVG SGQVDSVDLA RLALAYPTKA TLVEDPASAS DDGQWGVKLG 
YYAPQLGETE FGLYYMNYHS RRPLISGTTA NFNEDAIARD LQRLGGKAQS GEAMTREDIL 
ALETFSKAQI VYPEDIQLMG FSFNTLVGDT SVAGEIAHRL DEPLQIDDVE LLFAAMPQQL 
ANAGLNPEFD GISQVENYGP GEYAEGFIRL DTTQAQTTFT HLFGPTLGTD NLTMLAEVGG 
VWIHDMPSHD ELRLNGPGTS RSGGNPDMPG IIEAVHNGPE TNPFPTDFAW GYRLVAKADY 
NNVWGGVNIA PRVIFSHDVD GITPDPMFLF TEGKKSVALG VNFDYQSRWA ADLSYNTFFG 
GVGTTNAMAD RDYVSFNIKY SI