Gene Spea_1935 details

Gene Information

• Locus tag: Spea_1935
• ID: 5662329
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 2345755
• End bp: 2347800
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 641236524
• Product: carboxy-terminal protease
• Protein accession: YP_001501792
• Protein GI: 157961758
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0793] Periplasmic protease
• TIGRFAM ID: [TIGR00225] C-terminal peptidase (prc)

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.487036
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAAAAC TTTCTCTGGC TGTATCCATT GCCGGTATTT TTGTCGGATT CTCGGCGTGG 
GCTGTTAGCC CAACTATTCA ATTCAGCGAG TTACCCGCTC TAAAGCAGGA ACCGCAGCAT 
AAAGTAGCCA GTAAACGTGT TACTGGACTA TTTACCCGTT CTCATTATCA TCGCTTCGAC 
ATGGATGATG CATTTTCACA GCAAGTATTT GAACGTTATC TAAAGCAGTT GGATTACCGT 
AAGAATGTTT TGCTGCAATC TGATATCGAT AGCTTTAAAC CTTACTCGAC TCAATTTGAC 
AACATGTTGA AAAGTGGCGA CTTAAGCGAA GCATATGCGA TGTTTGAATT AGTACAAAAG 
CGACGTTACG AACGATTTGC TTACGCATTA TCACTGCTTG ATGAAGAGAT GGCATTTGAT 
GTTCCTGGCG ATAAATATGA GTTCGACCGC GAGAATGCGG ATTGGCCAAA GACTGAAGCT 
GATCTAAACG AACTCTGGCG CCAACGCGTT AAGTACGATG CCCTGAATCT TTCTTTAACC 
GGAAAGAATT GGGATGAAAT CGTGACTATC CTCGAGAAGC GTTATAACAA CTCGATTAAG 
CGTCTAAGTC AGACACACAG TGAAGATGTG TTCCAAGGGG TGATGAACGC CTTTGCTCGC 
ACTGTGGAGC CTCATACTAG TTATCTTTCA CCACGCAATG CCGAACGTTT CCAGATGGAA 
ATGAACCTAA GCCTTGAAGG CATTGGCGCA GTGCTTCAAG TTGATGATGA CTATACCGTG 
ATCAAGAGTC TCGTTGCTGG CGGTCCAGCA GCCACGAGTG AGAAGTTGTC ACCAGAAGAT 
AGAATTGTAG GTGTAGGCCA AGATGGCGGT GAAATTGTCG ACGTTATTGG TTGGCGATTG 
GACGATGTCG TTGAGCTGAT CAAAGGCCCT AAAGGCAGTA AAGTTATTCT AGAAATTTTG 
CCTAAGAAAG GTGGTACAAG CGCGAAGACT TTCGAGCTGA CCATTGTTCG AGACAAGATC 
CGTCTAGAAG ATCGTGCTGC AACATCTAAA GTGATTGAGC CGACAGATGG ACCTTATGCT 
AATCGAAAAG TCGGTGTTAT TCAGATCCCA GGTTTTTACA TGGATCTGTC TAAAGATGTT 
TCTAAAGAGT TGGCTGAATT AAAAGAAGCG AAAGTTGAAG GCATTATCAT TGACCTTCGT 
GGTAACGGTG GTGGCGCCTT AACGGAAGCG ACATTATTAA CCGGTTTGTT TATTGAACAA 
GGTCCTGTGG TACAAATTCG TGATGCTAAT GGTCGAGTTT CTCAAAACCG TGATAATGAC 
GGTCGTGTCA CTTATGATGG CCCACTGACT GTGATGGTCG ATAGATACAG TGCATCTGCT 
TCAGAGATTT TTGCTGCCGC ACTACAAGAT TATGACCGAG CGCTGATTGT GGGTGAATCG 
ACCTTTGGTA AAGGTACTGT TCAGCAGCAC AAGAGCTTAG GCCGCATCTA CGATATGTAC 
GAAAAACCTA TTGGTCATGT GCAGTATACG ATTGCTAAGT TCTACCGTAT TAATGGTGGC 
AGTACTCAGC TTAAAGGTGT GACACCTGAT ATTCCGTTCC CAAGTGCATT AGAGCCTGGT 
GAATACGGTG AAGCTGAAGA AGATAATGCG TTACCTTGGG ATAAAGTTCC TGTTGCGCAG 
TACGGTACGC TAAGCGAAAT TTATCCTCAG CTGATTGCCA GCTTAGATAG TAAGCATCAA 
GATAGAATTA AAACTGATGT TGAATTTGGC TATATTTTCC AAGATATAGC TGAGTTTAAA 
GAAAATCATG ATGATAAAAC GGTCTCATTA GTCAAGACTG AACGCTTAGC CGAGCGTGAA 
GACAATGAGA AAAAACAATT AGACCGTGCT AACGAAAGGC TTGTAAAAGA AGGCCAAGAA 
AAAGTTAAAT CATTAGATGA TATTCCTGAT GACGTCGAAG TTGCAGATGC ATTCTTAGAT 
GAAACCGCAT ACATTACTTT GGATTTAGCG GATATTGAAA AATTAGCTAA AAATCAAAAC 
AAGTAA 

 

Protein sequence

MRKLSLAVSI AGIFVGFSAW AVSPTIQFSE LPALKQEPQH KVASKRVTGL FTRSHYHRFD 
MDDAFSQQVF ERYLKQLDYR KNVLLQSDID SFKPYSTQFD NMLKSGDLSE AYAMFELVQK 
RRYERFAYAL SLLDEEMAFD VPGDKYEFDR ENADWPKTEA DLNELWRQRV KYDALNLSLT 
GKNWDEIVTI LEKRYNNSIK RLSQTHSEDV FQGVMNAFAR TVEPHTSYLS PRNAERFQME 
MNLSLEGIGA VLQVDDDYTV IKSLVAGGPA ATSEKLSPED RIVGVGQDGG EIVDVIGWRL 
DDVVELIKGP KGSKVILEIL PKKGGTSAKT FELTIVRDKI RLEDRAATSK VIEPTDGPYA 
NRKVGVIQIP GFYMDLSKDV SKELAELKEA KVEGIIIDLR GNGGGALTEA TLLTGLFIEQ 
GPVVQIRDAN GRVSQNRDND GRVTYDGPLT VMVDRYSASA SEIFAAALQD YDRALIVGES 
TFGKGTVQQH KSLGRIYDMY EKPIGHVQYT IAKFYRINGG STQLKGVTPD IPFPSALEPG 
EYGEAEEDNA LPWDKVPVAQ YGTLSEIYPQ LIASLDSKHQ DRIKTDVEFG YIFQDIAEFK 
ENHDDKTVSL VKTERLAERE DNEKKQLDRA NERLVKEGQE KVKSLDDIPD DVEVADAFLD 
ETAYITLDLA DIEKLAKNQN K