Gene Spea_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1904 
Symbol 
ID5662298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2314764 
End bp2315954 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content48% 
IMG OID641236493 
Productlytic murein transglycosylase 
Protein accessionYP_001501761 
Protein GI157961727 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase
[TIGR02282] lytic murein transglycosylase B 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.13322e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTAAAAT CAATCCCCCT GGCTACAGCG CTAATCCTAT CTACTTCTGC TGCTTATGCG 
GCAGACGAGC AGCCTAATTG GGCTAGCTGC GTGGCCGAGC TACAACAAAC GGCAAAAGCA
GAAGGTCTAT CTCAACAGAC CATAGAGACC ACGTTGGCCA ATGTTAAGTA CGTGCCGAGA
GTGATTGAAC TCGATCAAAA ACAACCTGAA TTTAGCACGT CTTTTGAAAA TTATTTTAGT
AAGCGGGTAA CAGATTGGCG AGTGGAGCAG GGGCGTAAGC TCTATAGTGA GCACAAAGTA
TTGTTACAAA AACTGGCAAA AGAATATGGC GTGCCGCCTC AGTACCTGCT TGCATTCTGG
GGACTAGAAA CTAATTTTGG CTCTTATAAG GGCAAGATGT CGGTATTAGA TTCATTGGCA
ACCTTGGCTT GCGATCCAAG GCGCAGTCGT TATTTCACCA CTGAGTTGAT GCAAGCATTA
AAGCTTAAAG AGCGATACAA CTTTGATGAA GCTGATATGG TCGGGTCTTG GGCTGGTGCC
ATGGGACACA CTCAATTTAT GCCGTCGGCC TATGCAAAAT ACGCTGTGGA TGGCAATGGT
GATGGTAAAG CAGACCTGTG GAACAGTACC GAAGATGCTT TAACCTCTGC GGCTAACTTC
TTACAAAATC TAGGTTGGAA ACGCAATGAA CGTTGGGGGC GAGAAGTCAC CTTACCGGAA
AACTTCTCAT ACGCGCACTT AGGCAAAGCC GAGTCTCAGC CGCTTACTCG TTGGGCAGAG
CTGGGGATCA CACAAACCAA TGGTGCACCG TTAAGTACGC CAGATATGCA AGCTGCACTT
TACCTGCCGT CGGGTCATAC GGGCCCCGCA TTTTTAGGTT ATGACAACTT TGATGTGATC
ATGCGCTGGA ATCGCTCAAC CTTTTACGCC ATCGCAGTAG GTCACCTTGC CGACAGAATC
AATGGCGCTG TAGCGCTAAA AGTGACACCA CCTAAGATGC CAAACTTGAG TCGTGCTCGA
GTTAAAGAGC TGCAAAACCA GCTGAACCAT TTAGGTTATG ATGTGGGTAA GGCCGATGGC
ATTTTGGGCT CAAAGTCGGT TAAAGGCTTA CAGAGCTTCC AAAAGAGTCA GGGGCTTGTT
GCCGACGGCT ACCCGGATGA AGCGACGTTT AAGGCGCTAA AGGTTAAGTA A
 
Protein sequence
MLKSIPLATA LILSTSAAYA ADEQPNWASC VAELQQTAKA EGLSQQTIET TLANVKYVPR 
VIELDQKQPE FSTSFENYFS KRVTDWRVEQ GRKLYSEHKV LLQKLAKEYG VPPQYLLAFW
GLETNFGSYK GKMSVLDSLA TLACDPRRSR YFTTELMQAL KLKERYNFDE ADMVGSWAGA
MGHTQFMPSA YAKYAVDGNG DGKADLWNST EDALTSAANF LQNLGWKRNE RWGREVTLPE
NFSYAHLGKA ESQPLTRWAE LGITQTNGAP LSTPDMQAAL YLPSGHTGPA FLGYDNFDVI
MRWNRSTFYA IAVGHLADRI NGAVALKVTP PKMPNLSRAR VKELQNQLNH LGYDVGKADG
ILGSKSVKGL QSFQKSQGLV ADGYPDEATF KALKVK