Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1897 |
Symbol | |
ID | 5662291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2305253 |
End bp | 2307295 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641236486 |
Product | integrase family protein |
Protein accession | YP_001501754 |
Protein GI | 157961720 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.17871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGATC TCAATAAAAT AATCTCAACC ATCATAAATG TCAGCAACGA TATCGTGGTA AAGGAATTAT CTACCAGTGA TATTAACGAA CTATCTCGGC TTGTATTGTG GGACAAAACA CCAGACGAAA AGCCGATGAC ATTTGGTGGA AACTACTTTA GACAGTCAAC CAAGGAGAAA GGACTTGTAA TTGATACAAG CTCACTAATG TTCGACTACG AACTTAAGAC AATGATGATT GCAGCATTAC ACCTTGGAAC AGTAAAAGGC GGCACACCGT ATAAATGGAA GACAGTTGTC AGTCGGGTTC GCACATTAAA ATCTTTTTGC TCTTTCTTGC AGACAAAAGG TTACAAGTCT TTTAGAGAGT TAAACAAGTC ACCAGAGTTG AAACTTCGGA ATTTAATCAC GGACTTTTTG AACGCTCCTA AATCAAAAGG TGGTATGGAG CAGGGGAAGC ACACCTCAGC TGCTAAGACC GTCCGTGAGG GATTAACCTT TCTGTATACA TATGGTTTGG TAAATAGCTC ACTACTGGCT CCATTGGTCG ATGAACTCAC CATTTCTAAA ATCACGAAAC ATGAAGAACA ACACCGTTTA AAGCATTCCA TCATTCCAAC AGGGGTGATG AAGTCAGTGA TTGAGTCATC AACCGACTAC ATAAACAACG TTAAGTCCAA CATTGGCTTA TTCATAGAAC CACATACAAA AGCCAACAAA AGAATTGAAG GAAATAATTG CAGCAATCCT GGCAGTATCA TTGCGGCGTC CTGCCGTAAT TTTGATAATG AACTAGGTTT AGGCTACAAC TTAGTACGAG ACCTAAACCT CCATGTCTAC ACATTGGTAT TAGCGTTTAC TGGTATGCGT GATAACGAAG TCTATGCGCT AAAAAACAAC AGCCACTCGC AACGAGTAGA AACTGGCGAA ACCGTATTCA CCATCAAAAG TCAACTATCA AAAACTACCG AGGGAACGAT TGAGCTGGAT TGGGTTGCAA ATGAAATCGT GTTTGAAGCG GTAGACTTAC TGAGTAAGGT TAACGAGATT TACAGGGAGC GCGCTAGATT GATGCTTGAG CACCATATGC ACAAGATGCC TAAAGGTCAT TTAGACCGAT ATGAAAAAGG ACTTAAAGAC AACCGGTTGT TTGGCATACA ACACACTAAA AATACCGCCA GATTTGTGCA GGCTTCCAGA GCGTCGGACG CTAACAGTGG TATCTCTATG AGCAAACATT CATTTCAGGT GACAGCTATT GACATCGAGC AGCTTGAAAA AATGAACTGC AACTACCAAT CAGTTAGCCA GCTGAGTGGC AAACGAGGCT TAAAATATAA AGTTGGTGAT TTATTTAACT TAACATCGCA TCAATTTAGA CATACTTTTG CTTGGTTTAT TATCGCCAAC CGATTAGGTG ATTTAGATGA CATTAAATAC CAGTTTAAGC ACCTTAACTC TGTAATGACG TTTGTTTATT CTGAGCGTGG TTATGAATCC CTTAGTGAGC TTAGAACGTG CATTGAATAC TTTGAGGAGC TAACCAACAA ACAGGCCATT GAAGACATTG TAGAGTCTGC CAAACAAAAA CAGGTAGCAG GAGGAGGTGG TGATAGGCTT TCCAAGTTCC TTGCTAAGTT AAACGTTAAT CAATCACAGG TCATTTATAC AACGGCCCAA CAACCACATT TCAATAGCAC TCAGGAGTTA ATTGATTTTG CCACTCGCCA CAGTGATAGT GTGAGAGGTT TGCCGCATGG CTATTGCACT AAAGGCGCAG GGTGTAAAAT AAAGAATGCG TCTGATCCCT CACATTGTTT GTATTGTGAT ACATACTATG CCACCCCCAA ACACTTGCCC TATTGGAAAG CGATTAAGTA TAGCTGTGAG CAAAAGATAG CGCGTATTAA TACCTTACCT GACACTTCGC GCTACCAGTC CTTCTTAACA GGCTTAGAAG ACAACCTTAA CGCTGCTAAT GAAATCATAA ATAACCTTAC TTCCACCACA CCAATTAACG AGCAAACAAC CGTAGAGAGC TAA
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Protein sequence | MSDLNKIIST IINVSNDIVV KELSTSDINE LSRLVLWDKT PDEKPMTFGG NYFRQSTKEK GLVIDTSSLM FDYELKTMMI AALHLGTVKG GTPYKWKTVV SRVRTLKSFC SFLQTKGYKS FRELNKSPEL KLRNLITDFL NAPKSKGGME QGKHTSAAKT VREGLTFLYT YGLVNSSLLA PLVDELTISK ITKHEEQHRL KHSIIPTGVM KSVIESSTDY INNVKSNIGL FIEPHTKANK RIEGNNCSNP GSIIAASCRN FDNELGLGYN LVRDLNLHVY TLVLAFTGMR DNEVYALKNN SHSQRVETGE TVFTIKSQLS KTTEGTIELD WVANEIVFEA VDLLSKVNEI YRERARLMLE HHMHKMPKGH LDRYEKGLKD NRLFGIQHTK NTARFVQASR ASDANSGISM SKHSFQVTAI DIEQLEKMNC NYQSVSQLSG KRGLKYKVGD LFNLTSHQFR HTFAWFIIAN RLGDLDDIKY QFKHLNSVMT FVYSERGYES LSELRTCIEY FEELTNKQAI EDIVESAKQK QVAGGGGDRL SKFLAKLNVN QSQVIYTTAQ QPHFNSTQEL IDFATRHSDS VRGLPHGYCT KGAGCKIKNA SDPSHCLYCD TYYATPKHLP YWKAIKYSCE QKIARINTLP DTSRYQSFLT GLEDNLNAAN EIINNLTSTT PINEQTTVES
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