Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1833 |
Symbol | |
ID | 5662228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2232132 |
End bp | 2232680 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641236423 |
Product | nitroreductase |
Protein accession | YP_001501691 |
Protein GI | 157961657 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0967243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGACGCAT TAGAATTATT GTTAACTCGC CAATCTACCC CAAGACTCAT CGCACCAGCA CCTAATCCAC AGCAACTGCA AACTATCTTA GACGCAGCAA CTCGTGCACC AGATCATGCG GGTCTGACAC CTTGGGAATT TATTATTGCC GAGGAGGATG GCCTAGCTCG ACTTGGGGAG GTTTTTGTCA AAGCATTGCA GGCGAAAGGA GCCGATGAAG ACTTAATTGC TAAGGCAAAG AATATGCCCC TAAGGGCGCC AATGGTGATT ACTGTTGTGG CTAAGGTAAT TGAACACCCA AAAGTTCCCG CGCTAGAGCA ACAACTTGCA GCAGGATGCG CTGTGATGGC AATGCAACAA GCGGCCTTTG CTCAAGGCTT AGGCGGTATA TGGCGTACAG GAGAGTTGGC CTTCGATGCT AACGTGTATC AATTACTTGG GTTACAAAGT ACCGATCAAA TTGTAGGGTT TCTCTACCTA GGCACTCCAG CGATAAAAGC CCCGACCAAA ACACTTAAAG ATGGCAAGAG CTTCGCTCGA TATTTATAG
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Protein sequence | MDALELLLTR QSTPRLIAPA PNPQQLQTIL DAATRAPDHA GLTPWEFIIA EEDGLARLGE VFVKALQAKG ADEDLIAKAK NMPLRAPMVI TVVAKVIEHP KVPALEQQLA AGCAVMAMQQ AAFAQGLGGI WRTGELAFDA NVYQLLGLQS TDQIVGFLYL GTPAIKAPTK TLKDGKSFAR YL
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