Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1804 |
Symbol | |
ID | 5662199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2203089 |
End bp | 2203754 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236394 |
Product | dethiobiotin synthase |
Protein accession | YP_001501662 |
Protein GI | 157961628 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0132] Dethiobiotin synthetase |
TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.511205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTTT TTGTAACGGG TACAGATACC GACTGTGGTA AGACGTTGAT CTCTTCTGCA TTGTTAGCAG CAGCAAAAGG CGAGACAGTA GGCTTTAAGC CAATAGCTTC TGGTTGCGAA CAAACCGAGA ATGGTCTTAG AAACAGCGAT GCGCTTGCAT TGATGGCAGC ATCGAGTATT AAGCTACCTT ACGAGGATAT CAATCCTTTT GCTTTTGAGC CTGCGATTGC GCCGCACTTA GCTGCAGCTG AGAAAGGTGT AAATTTGGCG CCTAATCGTA TCGAAGCCCA GTTAAAAATG GCTGAATATG TGGGGGCAGA TTTTTGCTTA ATTGAAGGCG CTGGTGGTTG GCGTCTACCG TTAGGAGAAG GGCATTTCCT TTCTGATGTG GTCCAGTCGA TGCAGTTACC GGTAATTTTA GTTGTCGGCA TGAAATTGGG TTGTTTGAAC CATGCGCTAT TAACGGCACA AGCGATAAAA GCCGATGGCT TAAACATTGT AGGCTGGGTA GCTAATCAAG TGGATAAAGA TATGGCCTAT CAAGAGCAAA ACCTAGAGAG CTTAAAAGCT TTATTGCCAG CGCCTTGTTT AGGCTATGTT CCTTATCTTG CCGAGGCAAC AGCCGAAGCT GCGGCTAGCC ATTTAGATCT AACATTATTA GCCTAA
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Protein sequence | MTFFVTGTDT DCGKTLISSA LLAAAKGETV GFKPIASGCE QTENGLRNSD ALALMAASSI KLPYEDINPF AFEPAIAPHL AAAEKGVNLA PNRIEAQLKM AEYVGADFCL IEGAGGWRLP LGEGHFLSDV VQSMQLPVIL VVGMKLGCLN HALLTAQAIK ADGLNIVGWV ANQVDKDMAY QEQNLESLKA LLPAPCLGYV PYLAEATAEA AASHLDLTLL A
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