| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1788 |
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| Symbol | sucA |
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| ID | 5662183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2182627 |
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| End bp | 2185449 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641236378 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001501646 |
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| Protein GI | 157961612 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCAAG GCATCATGAA AGCCTGGCTC GAATCGTCTC ATCTCAATGG TGCGAACTCG
ACCTATGTAG AAGAGATGTA TGAAGCCTAT CAAGAAGACC CGCTGTCGGT AACAGAAGAC
TGGCGTGTCG TGTTTGATAA CCTCCCTCTA GTTAATGGCG CATCGGCTGA TGCACCAGAA
GCTGCCCACT CTAAAGTACG TGACTATTTT CGTAGTCTTG CATTAGAAGG ACGTCAGAAA
GGTTCACCTA AGGTGACCGA CCATGAAGTC GATGCAAAAC AAGTTAAAGT CCTACAGTTA
ATTAACGCTC ACCGTTTCCG CGGTCATCAG AATGCCAATT TAGATCCGCT TGATATTTGG
AAGCGTGACA AGGTATCTGA GTTAGACCCA GCATTTCATG GCTTAGATAG CGATGATATG
CAGCGTCAAT TTAACACGGG TTCATTTGCT CATGGTGGCG AAACCATGAA GCTGGTGGAC
TTAGTTAAAG CACTTAAGGC CACTTACTGT GGTTCTATCG GTGCAGAGTA TATGCACATT
ACTGATACCG ATGAGAAACG CTGGCTCCAG CAACGTCTCG AACCTTCTCT CGGTGCTGCA
AATTACTCAA AAGAAGATAA GACTCGAATT CTTGAAGGAC TCAACGCCGC TGAAGGTATG
GAAAAATACC TAGGTGCTAA GTTCCCAGGG GCAAAGCGCT TCTCATTAGA AGGCGGCGAT
GCACTCGTTC CTATGATGCG CGAAATCATT TATCGCGCTG GCGATGCGGG TACCAAAGAA
GTGGTTATTG GTATGGCGCA CCGTGGTCGT TTGAACGTAC TGGTAAATAT TCTTGGTAAG
AAGCCATCAG AATTGTTTGA CGAATTCGCT GGTAAGCACA GCGACGAGCT AAATGGCTCG
GGTGACGTTA AGTATCACCA AGGATTTTCG TCAGATTTTG AAACACCAGG TGGCAACGTT
CACCTTGCAC TGGCCTTTAA CCCATCTCAT CTAGAAATTG TTAATCCTGT GGTTATTGGC
TCTGTTCGTG CTCGACTTGA CCGTCGTGGT TGCGATACGG GTTTGCAAGT GATGCCAATC
ACTATTCACG GTGACTCTGC TATTACAGGT CAGGGTATTG TGCAAGAAAC CTTTAACATG
TCACAAACCC GTGGCTTTAA GGTTGGCGGT AGTATCCGCA TCGTAGTCAA TAACCAAGTG
GGTTTCACCA CGAACTTAAC TGAAGACGTA CGTTCTACTG AGTACTGCAC CGATATCGCT
AAAATGGTTC AGGCACCGAT TTTCCACGTT AATGCCGATG ACCCTGAAGC CGTCGCGTTT
GTTTCGCAAC TTGCGGTTGA TTATCGTAAC GAGTTCAAGC GTGATGTGGT TATCGATCTG
GTTTGTTATC GCCGTCATGG CCATAACGAA GCCGATGAGC CAAGTGCCAC TCAGCCATTG
ATGTACGCCA AGATCAAGAA ACATCCAACA CCAAGAAAGA TTTATGCCGA CAGACTGATT
GCTGAAAATG CGCTTGGTAG CGATGAAGTC ACATCTATGG TGAACGATTA CCGTGATGCA
CTCGATGGCG GTGATTGTGT CGTTAAAGAA TGGCGACCAA TGACCTTACA CTCGGTCGAC
TGGAGCCCTT ATATTGGGGC CGATTGGAAT GATGCATACG ATGCACAGAT GTCAATTGAG
CGCATCAAAA ATCTGGCTGA TAAAATCAGT TATGTGCCTG AAAGCCATAA GCTGCAATCA
CGCGTTGCAA AAATCTACAA AGATCGTCTC GCGATGGCAT CTGGCGAGAA ACTGCTAGAT
TGGGGCTTTG CCGAGACATT GGCTTATGCA TCGATTCTTG AAGACAAGAA GCGCATTCGT
ATAACCGGTC AAGACTCAGG CCGTGGTACT TTCTTCCATC GCCACGCTGT GCTGCATAAC
CAAAATGATG CAACGGCTTA TATGCCGCTG CGTAATATTG CAGATGAGCA AGGACCAATA
GATATTACCG ACTCGGTATT ATCTGAAGCG TCGGTACTGG CATTTGAATA TGGCTATGCG
ACTGCTGAAC CAGGCGGCTT AACGCTTTGG GAAGCGCAGT TTGGTGATTT TGCTAACTGT
GCCCAAGTGG TTATTGACCA GTTCCTATCA TCCGGTGAGC AGAAGTGGGG CCGTTTATGT
GGTCTAACTA TGTTGCTACC ACATGGTTAT GAAGGCCAAG GTCCAGAGCA CTCGAGTGCC
CGTTTAGAAC GCTTCCTACA GCTTTGTGCT AATCACAACA TGCAAGTGTG TGTACCATCG
ACTCCAGCTC AGGTTTACCA CATGTTGCGT CGCCAGGTTG TGCGCCCAAT GCGCCGCCCG
CTTGTGGTTA TGTCACCTAA GTCTTTACTG CGTCATCCAT TAGCCGTATC AAGTCTGGAG
GAGCTCGCTG AAGGCTCGTT CCAGAATATC ATCGGCGAGA TTGATGAATT AAATGCAAGT
AAAGTCGATA GAGTCGTATT CTGTAGCGGA AAGGTTTATT TTGAGCTACT CGAGCGTCGC
CGTAAAGAAG GCTTAGACAA TGTTGCGCTA ATTCGTGTTG AACAGCTGTA CCCGTTCCCA
CACGAAGAAG CGGCAGCCGT TCTTGCCGAA TATAGCCATG TTAAAGATTT CGTTTGGTGC
CAAGAAGAGC CGCAAAACCA AGGTGCTTGG TATTGCAGTC AGCACCATTT CTGGAGCGTC
ATCCCGCAAG GAGCTCAATT GAGCTACGCC GGTCGTGAAG CGTCAGCTGC GCCAGCATGT
GGTTATCCTG CATTGCATGC TCAGCAACAA GAATCATTAA TCAGCAGTGC GTTGAAACTG
TAG
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| Protein sequence | MHQGIMKAWL ESSHLNGANS TYVEEMYEAY QEDPLSVTED WRVVFDNLPL VNGASADAPE
AAHSKVRDYF RSLALEGRQK GSPKVTDHEV DAKQVKVLQL INAHRFRGHQ NANLDPLDIW
KRDKVSELDP AFHGLDSDDM QRQFNTGSFA HGGETMKLVD LVKALKATYC GSIGAEYMHI
TDTDEKRWLQ QRLEPSLGAA NYSKEDKTRI LEGLNAAEGM EKYLGAKFPG AKRFSLEGGD
ALVPMMREII YRAGDAGTKE VVIGMAHRGR LNVLVNILGK KPSELFDEFA GKHSDELNGS
GDVKYHQGFS SDFETPGGNV HLALAFNPSH LEIVNPVVIG SVRARLDRRG CDTGLQVMPI
TIHGDSAITG QGIVQETFNM SQTRGFKVGG SIRIVVNNQV GFTTNLTEDV RSTEYCTDIA
KMVQAPIFHV NADDPEAVAF VSQLAVDYRN EFKRDVVIDL VCYRRHGHNE ADEPSATQPL
MYAKIKKHPT PRKIYADRLI AENALGSDEV TSMVNDYRDA LDGGDCVVKE WRPMTLHSVD
WSPYIGADWN DAYDAQMSIE RIKNLADKIS YVPESHKLQS RVAKIYKDRL AMASGEKLLD
WGFAETLAYA SILEDKKRIR ITGQDSGRGT FFHRHAVLHN QNDATAYMPL RNIADEQGPI
DITDSVLSEA SVLAFEYGYA TAEPGGLTLW EAQFGDFANC AQVVIDQFLS SGEQKWGRLC
GLTMLLPHGY EGQGPEHSSA RLERFLQLCA NHNMQVCVPS TPAQVYHMLR RQVVRPMRRP
LVVMSPKSLL RHPLAVSSLE ELAEGSFQNI IGEIDELNAS KVDRVVFCSG KVYFELLERR
RKEGLDNVAL IRVEQLYPFP HEEAAAVLAE YSHVKDFVWC QEEPQNQGAW YCSQHHFWSV
IPQGAQLSYA GREASAAPAC GYPALHAQQQ ESLISSALKL
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