| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1783 |
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| Symbol | gltA |
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| ID | 5662178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2177495 |
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| End bp | 2178784 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236373 |
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| Product | type II citrate synthase |
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| Protein accession | YP_001501641 |
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| Protein GI | 157961607 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0004224 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGATA ATATAGCCAC ATTAGAACTA CCAGGGAATG ATTCAATCGA ACTGCCTATT
AAAGAAGGTA CGGCAGGATT TGATGTAATC GACATCAGTA AGCTAGGTAG CAAAGGTTAC
TTTACTTTCG ATCCAGGATT TCTAGCGACC GGATCTTGTG AATCTGCAAT TACTTATATC
GACGGAGAGC AAGGAATACT GCTACACCGT GGTTACCCTA TCGACCAGTT GGCAGTAGAA
TCTAATTACT TAGATTTATG TTATTTATTG CTTTATGGTG AGCTTCCAAA TAAAGCACAA
TACGACGAAT TCGTATACAC AGTAAAAACG CACACCATGG TGAATGAGCA GTTGTCTGCT
TTCTTTGCAG GTTTCAGACC TGATGCTCAT CCTATGGCAA TGCTATGTGG TGTAACAGGT
GCTTTATCGG CATTTTACCA AGACTCTTTG GATGTAAATG ACGAGCGTCA CCGTGAGATT
GCGGCCTATC GTTTGGTGTC AAAAATGCCA ACGATTGCAG CAATGTGTTA CAAGTATTCA
ATCGGTCAAC CGTTTGTATA CCCACGCAAC GACTTAAGCT ATGCGGGTAA CTTCTTAAGC
ATGATGTTTG CTGTACCATG TGAAGAATAC AAGGTTAACC CAATCGTAGA ACGCGCAATG
GATCGTATCT TTATCCTACA CGCGGATCAC GAGCAAAATG CATCGACTTC TACCGTTCGT
CTAGCAGGCT CTTCAGGTGC TAACCCATTT GCATGTATTG CTGCGGGTAT CGCATCACTA
TGGGGACCGG CTCACGGCGG CGCTAACGAA GCATGTCTGA ATATGCTGGA AGAGATTGGC
ACTGTCGATC GTATTCCAGA GTTCATTGCA CGTGCTAAAG ACAAAGAAGA TCCATTCCGT
CTAATGGGCT TCGGTCACCG TGTTTACAAG AACTTCGACC CTCGCGCTAA AGTCATGCGT
GAAACGTGTC ATGAAGTCCT TGCCGAACTT AAAGTGAACG ATCCGCTTCT AGATGTGGCA
ATGGAACTTG AGCGTATTGC ACTAGAAGAC GAGTATTTCG TGTCTAAGAA GCTTTATCCA
AATGTTGATT TCTACTCAGG GATCATCATG AAGGCGATTG GCATTCCGAC AAGTATGTTC
ACCGTGCTGT TCGCGTTAGC GCGTACTGTC GGCTGGATTG CTCACTGGAA AGAGATGCTA
GATCAGCCAG GTCATAAGAT CAGCCGTCCT CGCCAGCTTT ATACCGGTGA TGCGAAGCGT
GACTTTGTTG ACTTAGCTAA ACGGGATTAA
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| Protein sequence | MADNIATLEL PGNDSIELPI KEGTAGFDVI DISKLGSKGY FTFDPGFLAT GSCESAITYI
DGEQGILLHR GYPIDQLAVE SNYLDLCYLL LYGELPNKAQ YDEFVYTVKT HTMVNEQLSA
FFAGFRPDAH PMAMLCGVTG ALSAFYQDSL DVNDERHREI AAYRLVSKMP TIAAMCYKYS
IGQPFVYPRN DLSYAGNFLS MMFAVPCEEY KVNPIVERAM DRIFILHADH EQNASTSTVR
LAGSSGANPF ACIAAGIASL WGPAHGGANE ACLNMLEEIG TVDRIPEFIA RAKDKEDPFR
LMGFGHRVYK NFDPRAKVMR ETCHEVLAEL KVNDPLLDVA MELERIALED EYFVSKKLYP
NVDFYSGIIM KAIGIPTSMF TVLFALARTV GWIAHWKEML DQPGHKISRP RQLYTGDAKR
DFVDLAKRD
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