Gene Spea_1746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1746 
Symbol 
ID5662141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2123470 
End bp2124144 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content46% 
IMG OID641236335 
Producttwo component transcriptional regulator 
Protein accessionYP_001501604 
Protein GI157961570 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.80188e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATAT TAGTTGTTGA AGATGACCCG ATTCTATCTC ACCACCTAAA AGTGCAACTC 
AGCGAATTAG GCAATCAAGT TCAAGTTGCG CTAACAGCGA AAGAGGGATT TTATCAAGCC
ACTAACTATC CTATCGATGT GGCTATCGTC GACTTAGGCC TTCCAGACCA AGACGGTATA
AGCCTAATTC AAAGTCTTCG TGACGAGGGT TTAAAAGCCC CGGTATTGAT CTTAACCGCT
CGGGTTAATT GGCAAGATAA GGTAGAAGGA CTGAATGCTG GCGCCGATGA CTACCTAGTT
AAACCTTTCC AGAAAGAAGA GTTAGTCGCT CGCTTAGATG CCCTCGTGCG TCGTAGTGCT
GGCTTTGTAA AACCCCAAAT CACCAGCGGT GCACTTGAGC TTGATCTTGC AGCCAAGCAA
GTCAGCCTCA ACGAGCAACC TATGGAAGTG ACAGCATTTG AATATTTGAT TCTTGAGTAC
CTGATGCGAC ACTGCCATGA GGTAGTGGCT AAACAGCGCC TGCTGGATGT GATCTATGGC
GATAAGGAAG GTGACCCCAA TACTATCGAA GTCATGGTCA GCCGCCTACG TAAGAAACTC
ACCAAAGGCG GTATCGAAAA CCCTATTGTA ACCATTCGAG GCCAAGGGTA TAAATTCAAT
CTGCCATGCA ATTAA
 
Protein sequence
MRILVVEDDP ILSHHLKVQL SELGNQVQVA LTAKEGFYQA TNYPIDVAIV DLGLPDQDGI 
SLIQSLRDEG LKAPVLILTA RVNWQDKVEG LNAGADDYLV KPFQKEELVA RLDALVRRSA
GFVKPQITSG ALELDLAAKQ VSLNEQPMEV TAFEYLILEY LMRHCHEVVA KQRLLDVIYG
DKEGDPNTIE VMVSRLRKKL TKGGIENPIV TIRGQGYKFN LPCN