| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1746 |
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| Symbol | |
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| ID | 5662141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2123470 |
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| End bp | 2124144 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236335 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001501604 |
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| Protein GI | 157961570 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000480188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGAATAT TAGTTGTTGA AGATGACCCG ATTCTATCTC ACCACCTAAA AGTGCAACTC
AGCGAATTAG GCAATCAAGT TCAAGTTGCG CTAACAGCGA AAGAGGGATT TTATCAAGCC
ACTAACTATC CTATCGATGT GGCTATCGTC GACTTAGGCC TTCCAGACCA AGACGGTATA
AGCCTAATTC AAAGTCTTCG TGACGAGGGT TTAAAAGCCC CGGTATTGAT CTTAACCGCT
CGGGTTAATT GGCAAGATAA GGTAGAAGGA CTGAATGCTG GCGCCGATGA CTACCTAGTT
AAACCTTTCC AGAAAGAAGA GTTAGTCGCT CGCTTAGATG CCCTCGTGCG TCGTAGTGCT
GGCTTTGTAA AACCCCAAAT CACCAGCGGT GCACTTGAGC TTGATCTTGC AGCCAAGCAA
GTCAGCCTCA ACGAGCAACC TATGGAAGTG ACAGCATTTG AATATTTGAT TCTTGAGTAC
CTGATGCGAC ACTGCCATGA GGTAGTGGCT AAACAGCGCC TGCTGGATGT GATCTATGGC
GATAAGGAAG GTGACCCCAA TACTATCGAA GTCATGGTCA GCCGCCTACG TAAGAAACTC
ACCAAAGGCG GTATCGAAAA CCCTATTGTA ACCATTCGAG GCCAAGGGTA TAAATTCAAT
CTGCCATGCA ATTAA
|
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| Protein sequence | MRILVVEDDP ILSHHLKVQL SELGNQVQVA LTAKEGFYQA TNYPIDVAIV DLGLPDQDGI
SLIQSLRDEG LKAPVLILTA RVNWQDKVEG LNAGADDYLV KPFQKEELVA RLDALVRRSA
GFVKPQITSG ALELDLAAKQ VSLNEQPMEV TAFEYLILEY LMRHCHEVVA KQRLLDVIYG
DKEGDPNTIE VMVSRLRKKL TKGGIENPIV TIRGQGYKFN LPCN
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