Gene Spea_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1712 
Symbol 
ID5662108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp2079870 
End bp2080424 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content43% 
IMG OID641236299 
ProductD,D-heptose 1,7-bisphosphate phosphatase 
Protein accessionYP_001501571 
Protein GI157961537 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0241] Histidinol phosphatase and related phosphatases 
TIGRFAM ID[TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000000943222 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATCGAG CGGTATTTTT AGACAGAGAT GGCGTTATCA ATCTAGACCA TGGTTATGTA 
CACCAAGTTG ACGATTTTGA ATATATAGAC GGTGTGTTTG ACGCGTGTGC ATCTCTTAAA 
GAGATGGGAT ATTTGCTTGC TGTTGTTACC AACCAATCAG GGATTGCTCG AGGAATGTAC 
AGTGAAGAAC AGTTTCATTC ATTGACAGAG TGGATGGATT GGAACTTTGT CGATAAAGGC 
GTTGAGCTAG ACGGCATATA TTACTGTCCT CATCATGCTG AAAAGGGCGT TGGCGAATAT 
AAGATTGATT GTGATTGCCG CAAACCAAAA CCTGGCATGC TTAACTCAGC TGCACAATTC 
TTAAAAATCG ATTTATCACA GTCTGTCATG GTCGGTGATA AGCGTGACGA TATGTTGGCT 
GCTGAGGCCG CAGGTATACC GACACGAATT CTTGTTAGAA CAGGTAAATC TGTTACCGAT 
GACGCGATTG CTGCTGCGAC TGTCGTTTTA GATTCAATTG CAGATGTCCC CGCATATCTT 
TCGAGTCAAG CTTAG
 
Protein sequence
MNRAVFLDRD GVINLDHGYV HQVDDFEYID GVFDACASLK EMGYLLAVVT NQSGIARGMY 
SEEQFHSLTE WMDWNFVDKG VELDGIYYCP HHAEKGVGEY KIDCDCRKPK PGMLNSAAQF 
LKIDLSQSVM VGDKRDDMLA AEAAGIPTRI LVRTGKSVTD DAIAAATVVL DSIADVPAYL 
SSQA