| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1682 |
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| Symbol | |
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| ID | 5662078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2040338 |
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| End bp | 2041306 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641236269 |
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| Product | cysteine synthase A |
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| Protein accession | YP_001501541 |
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| Protein GI | 157961507 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0031] Cysteine synthase |
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| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.222302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAAAA TTTTCGAAGA TAATTCACAA ACAATTGGTA ACACCCCTCT TGTCCGCCTA
AACCGCGTAA GTAATGGTAG AGTGCTTGCA AAAGTAGAAG CGCGTAACCC AAGCTTCAGC
GTTAAGTGCC GTATCGGTGC CAATATGATC TGGGATGCTG AGAAAAAAGG CATTCTCACT
CAGGAGCAAG AGCTCATTGA GCCGACATCG GGTAACACGG GTATCGCACT CGCTTATGTT
GCCGCTGCTC GCGGATATAA GTTAACCCTC ACTATGCCAA ACACCATGAG TTTAGAGCGT
AGAAAGTTAC TCAAAGCCCT TGGTGCAAAT CTTGTACTCA CCGATGGCGC TAAAGGTATG
AAAGGCGCGA TTGATAAGGC TGAAGAGATC AGACAGACTG CCCCAGAAAA GTACGTCTTA
CTGCAGCAGT TCAACAACCC TGCTAACCCA GAAATTCATG AGAAAACGAC CGGCCCAGAG
ATCTGGAATG ATACCGACGG TGCAGTCGAT GTTGTTGTTG CCGGTGTAGG TACAGGTGGC
ACCATTACCG GTGTTAGCCG TTACATTAAG AACACTCAAG GCAAGGCGAT CACTTCGGTT
GCGGTTGAGC CAACAGACTC ACCAGTTATT GCGCAGACGC TTGCGGGCCA AACTGTACAA
CCTGGACCAC ACAAAATCCA AGGTATTGGC GCTGGTTTTA TTCCTGGCAA TTTAGATCTT
AATCTTGTCG ATCGTGTTGA AGCCGTAACC AATGAAGAGT CTATCGAGAT GGCTCAGCGC
TTAATGAAAG AAGAAGGGTT CCTTGTGGGT ATTTCTTCAG GCGCCGCCGT TGTGGCAGCT
AACCGTATCG CTGCATTGCC TGAATTTGAA GGGCAAAACA TTGTGGTTAT TTTACCTTCT
GCTGCAGAAC GCTACTTATC TTCAGTACTG TTTCAAGGTG AATTTAGCGA CGCTGAAAAC
GTTCAATAA
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| Protein sequence | MSKIFEDNSQ TIGNTPLVRL NRVSNGRVLA KVEARNPSFS VKCRIGANMI WDAEKKGILT
QEQELIEPTS GNTGIALAYV AAARGYKLTL TMPNTMSLER RKLLKALGAN LVLTDGAKGM
KGAIDKAEEI RQTAPEKYVL LQQFNNPANP EIHEKTTGPE IWNDTDGAVD VVVAGVGTGG
TITGVSRYIK NTQGKAITSV AVEPTDSPVI AQTLAGQTVQ PGPHKIQGIG AGFIPGNLDL
NLVDRVEAVT NEESIEMAQR LMKEEGFLVG ISSGAAVVAA NRIAALPEFE GQNIVVILPS
AAERYLSSVL FQGEFSDAEN VQ
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