| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1661 |
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| Symbol | |
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| ID | 5662057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2012305 |
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| End bp | 2013048 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641236248 |
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| Product | ABC transporter related |
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| Protein accession | YP_001501520 |
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| Protein GI | 157961486 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.044489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAA ATAGTGCCAT AACCGTAAGT CACCTAGTTA AATCAGTTGT TACTCAAGAG
GGAGAACTGA CTATCCTCAA CGGCATTAAT ATGGATGTCA AGCATGGCGA GAGTGTGGCT
ATCCTTGGAC CTTCCGGTTC AGGTAAATCG ACCTTGCTCG GATTGCTTGC AGCACTCGAC
TCACCATCGA GTGGTTCAAT AAAGCTCGAT GGTGTCGCGT TAGAACAGTT AAACGAAGAG
TCGAAGGCTG CACTGCGAAA GCAAAAAGTG AGCTTTATTT TTCAGTCTTT TATGTTGGTC
GATACATTAA ATGCGCTTGA GAACGTGATG CTGCCAGCCG AGCTCGCTGG TGTGGCTAAG
GCGAAAGAAA AGGCCGAGGC CATGCTAGAG CGGGTGGGCT TAAGTCATCG ACTGACTCAT
TTTCCGAATC AGTTATCTGG CGGTGAGCAG CAAAGAGTGG CGATTGCCAG AGCCTTTATT
TGCGAGCCTA AGGTGCTGTT TGCCGATGAG CCGACAGGGA ATCTAGACTC GGCCAATAGC
GATAAGATTG CCGACATGCT GTTTGAGCTG AATCGAGAGA GTGATACGAC TTTAGTACTC
GTCACTCATG ATATGGAGCT TGCGAGCCGC TGTCAGCGCC AATTCATCAT GGATTCAGGC
CGCTTGAATG AAAAACTTAC TGAGCAGCCG CTTAACCTGA AAACGGCTAC AGAGGTAACA
GAAGAGGCTA GCGCATGGAG TTAA
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| Protein sequence | MSENSAITVS HLVKSVVTQE GELTILNGIN MDVKHGESVA ILGPSGSGKS TLLGLLAALD
SPSSGSIKLD GVALEQLNEE SKAALRKQKV SFIFQSFMLV DTLNALENVM LPAELAGVAK
AKEKAEAMLE RVGLSHRLTH FPNQLSGGEQ QRVAIARAFI CEPKVLFADE PTGNLDSANS
DKIADMLFEL NRESDTTLVL VTHDMELASR CQRQFIMDSG RLNEKLTEQP LNLKTATEVT
EEASAWS
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