Gene Spea_1651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1651 
Symbol 
ID5662048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1996502 
End bp1997530 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content43% 
IMG OID641236239 
Productputative periplasmic protease 
Protein accessionYP_001501511 
Protein GI157961477 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID[TIGR00706] signal peptide peptidase SppA, 36K type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.59076e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAATTCC TGTACGAATA TGGTTTATTT TTGGCCAAAG CGGTCACTAT CGTCGCTGCG 
ATTATTGCGG TAGTGATTGT TGTCTTAGCG TCTTCTATGA AGCAGAAAGC TGAAAAGGGC
GAGCTTAAGT TAACCAACCT AAGCGAAAAC CTAGCATTAT TGAAGCATGA CTTAAAAGAA
GAGTTATTAT CTAAAAAAGC ATTCAAGGCC TATGAGAAGC AATTAAAGGC TGACGAGAAA
GCCAAAGAGA AAGAGCAAAA AGATCAGGTT GAAGAAGCTG AGCCTAAAGT GTTTGTTGTC
GACTTTAAAG GTAGCATTGA TGCTGGCGAA GTGGCATCAC TGCGTGAAGA GATCAGCGCT
ATCTTAGCTA TCGCAGATAA GGGCGATGAA GTTATTGTTA ATGTTGAGAG TGGCGGTGGC
ATGGTTCACG GTTACGGTTT GGCATCTAGC CAGCTTGACC GTTTAAGACA GGCTGAGATC
CCTCTGACTA TCTGCGTTGA CAAAGTGGCC GCCAGTGGCG GTTATATGAT GGCCTGTGTT
GCCAACAAAA TTTATTCAGC TCCTTTTGCT ATCGTAGGTT CTATCGGCGT GGTGGCTCAG
GTACCTAACT TTAATCGTTT ATTGAAGAAG CACGATATCG ATTATGAGCA ACACACAGCA
GGTGACTTTA AGCGTACTCT GACTATCTTT GGTGAAAATA CCGATGAAGG GCGTGAGAAG
TTCCAAAAAG AGTTGGAAGA GACTCATGTG CTGTTTAAAG CGTTCATTGC CAAGTACCGT
CCTGATTTAG ATCTTGATAA AGTGGCGACA GGTGAGCATT GGTATGGCCA ACAAGCAATT
GAGCTTGGCC TTGTCGATGA AATCGCCACA AGTGATGATG TCATCATGAA GCTTGCTAAT
GAGCGTACCG TGATTAAGGT GCAGTATCAG CTTAAGAAAA CATTATCAGA TAAAATTGCC
CATGGTGCAT CACTATCTTT TAATTCTATT TTCAATAAAT TTGCTGAGAA GAACCAGCCA
CTCAAGTAA
 
Protein sequence
MEFLYEYGLF LAKAVTIVAA IIAVVIVVLA SSMKQKAEKG ELKLTNLSEN LALLKHDLKE 
ELLSKKAFKA YEKQLKADEK AKEKEQKDQV EEAEPKVFVV DFKGSIDAGE VASLREEISA
ILAIADKGDE VIVNVESGGG MVHGYGLASS QLDRLRQAEI PLTICVDKVA ASGGYMMACV
ANKIYSAPFA IVGSIGVVAQ VPNFNRLLKK HDIDYEQHTA GDFKRTLTIF GENTDEGREK
FQKELEETHV LFKAFIAKYR PDLDLDKVAT GEHWYGQQAI ELGLVDEIAT SDDVIMKLAN
ERTVIKVQYQ LKKTLSDKIA HGASLSFNSI FNKFAEKNQP LK