Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1626 |
Symbol | |
ID | 5662023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1967581 |
End bp | 1968459 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236214 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001501486 |
Protein GI | 157961452 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.954407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAAT GGGTTGAGAA GATCTCCTTT AACGAAGCCA GTCCATTAGC AGTGCAAGCT CAAGATACTC AATTTGGCTT ACATCGTAAA AAACCCGCTG TAATGCCCCA TAGTCATTGG CATGGCCATA TAGAGATCAA TTACCTGTTT GATTGCTCAG CCGATTATCT GATTAATGGC CAAGAGATCA CTGTGCCTGA GGGGCGGATG ATCATCTTTT GGGCCTCTTT CCCCCATCAA ATGGTCGCTT CTCGTGGCGA CGGCGAGCTA GTCAATATCT ATATCCCGTT GCAATCCTTT TTGACATGGA TGCTGCCAAG TAGCTTTGTG AGTCAGTTGC TGCACGGCGA GGTTATCGTG TCTGACAGCT TATATGCTTG CGATAAAGAG CTGACGCAGA TCTGGGAAAC CGATATTAAA CGAAATGCCC CTTTACTAAC CAGCCAGGTG ATTAACGAGA TCCGCGGCCG AATTCGACGC ATGTCGATAG AGGACTACAG CACCTTCGAG CTAGCGAATC GAGTGGCGAA ACAGGAAGAT AAACCCGTGT TTGGTGGCTT AAACCATATC CAAACCATGT TGCGTTATAT TGCCGACAAT TACGATCAAA AAATTACAAT TGAAAATGTT TCAACCTCTA CTGGCTTACA TAAAAACTAT GCCATGAAGT TGTTTAATCG GGTGATGAAA GTGTCGATTA AGCAATACAT TAACCAGCTT AGGCTACAGC ATGCCCAGGC GCTCCTTATC GATACCCAAA GTCCTGTGCT CAATATTGCA CTGGAAGCGG GCTTTGGCTC AGTTAGTCGC TTCTATGATA TTTTTCAGCG AGAATTTGGC ATGTCGCCAC TTGAATTCAG ACGAAAAGTA AATTGCTGA
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Protein sequence | MFEWVEKISF NEASPLAVQA QDTQFGLHRK KPAVMPHSHW HGHIEINYLF DCSADYLING QEITVPEGRM IIFWASFPHQ MVASRGDGEL VNIYIPLQSF LTWMLPSSFV SQLLHGEVIV SDSLYACDKE LTQIWETDIK RNAPLLTSQV INEIRGRIRR MSIEDYSTFE LANRVAKQED KPVFGGLNHI QTMLRYIADN YDQKITIENV STSTGLHKNY AMKLFNRVMK VSIKQYINQL RLQHAQALLI DTQSPVLNIA LEAGFGSVSR FYDIFQREFG MSPLEFRRKV NC
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