Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1621 |
Symbol | |
ID | 5662018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1962075 |
End bp | 1963589 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236209 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_001501481 |
Protein GI | 157961447 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTGGTA TTGTCGGAAT AGTTGGCCAG TCATCGGTTA ATCAAACCAT TTATGATGCA CTGACTGTGC TCCAGCATCG TGGACAGGAT GCTGCTGGCA TTGTGACCGT CGATGGCAGC GCGTTTAGAT TGCGTAAAGC CAATGGTTTG GTGAAAGACG TTTTTGAACC AAAGCATATG CAGCGTCTAC AAGGCAATGC AGGCATAGGT CACGTTCGTT ACCCTACGGC AGGAAGCTCT AGCGCTTCTG AAGCTCAGCC GTTTTATGTT AACTCTCCTT TTGGTATTTC ATTGGCGCAC AATGGTAACT TGACCAATAC GGTTGAGCTG CATGAGCGTT TATTGAAGCA GCGCCGTCAT GTTAATACCA CATCAGACTC TGAAGTGTTA CTTAACTTAC TCGCCGATGA ACTTCAGCAA TCTACAACAG ATGATCTTAG CGCTGAAGAT GTGTTTAATG CTGTTGCCAA GGTGCATGAT ATTACTCGTG GTGCCTATGC GGTAGCTGCC ATGATTATCG GCCAAGGGCT AGTTGCTTTT AGAGATCCAT TTGGTATTCG TCCGTTAGTG CTAGGTAAGC ATGAAACGGC GTCAGGCACC GAATACATGA TCGCATCTGA AAGCGTTGCG TTAGATGCGG TGGGTTTTGA GTTTATGCGT GACGTAGCGC CTGGTGAGGC GGTTTATATT ACCCTTGATG GTGAGCTATA TACTCGCCAA TGCGCACACT CGCCAAGCTA CTCTCCTTGT ATCTTTGAAT TCGTATATTT TGCTCGTCCT GACTCAACCA TTGATAACAT TTCTGTTTAT AGCAGCCGTG TTAATATGGG CACCATGTTG GGCGAAAAAA TTAAGAGAGA GTGGGAAGAT CATGATATCG ATGTAGTTAT CCCGATCCCT GAAACCTCTT GCGATATCGC ACTCGAAATT GCACGTCATA TGGATCTGCC ATACCGTCAG GGCTTCGTTA AAAATCGCTA TATCGGCCGT ACTTTTATCA TGCCAGGTCA GCAAGAGCGT AAGAAGTCTG TACGCCGTAA GCTCAACGCG ATTGGTGCAG AGTTTAAAGG CAAGAACGTA TTACTTGTTG ATGACTCTAT TGTGCGTGGT ACCACGTCTG AGCAGATCAT CGAGATGGCA CGTGATGCTG GCGCTAATAA AGTGTATTTC GCGTCAGCAG CACCAGAAAT TCGTTTCCCG AATGTGTACG GTATCGATAT GCCAACCACA AATGAACTCA TTGCCCATGG ACGCGATGTT GAAGAGATCA ATAACTTAAT CGGCGCCGAC GGCATGATTT TCCAATCGCT ACCGGATTTA ATTGAAGCGG TACGTAAAGA AAATCCAAGT ATTAAGCGTT TTGAAACCTC TGTATTTGAC GGTAAGTACG TCACCAATGA CGTAAATCAA GAGTACTTAG ATTACATTAC ACAATTGCGT AACGATGATG CTAAGGCAAA TCGTAGCAAA GATATTGGCA CTAACTTAGA GATGCATAAC GTCTGTCATC CTTAA
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Protein sequence | MCGIVGIVGQ SSVNQTIYDA LTVLQHRGQD AAGIVTVDGS AFRLRKANGL VKDVFEPKHM QRLQGNAGIG HVRYPTAGSS SASEAQPFYV NSPFGISLAH NGNLTNTVEL HERLLKQRRH VNTTSDSEVL LNLLADELQQ STTDDLSAED VFNAVAKVHD ITRGAYAVAA MIIGQGLVAF RDPFGIRPLV LGKHETASGT EYMIASESVA LDAVGFEFMR DVAPGEAVYI TLDGELYTRQ CAHSPSYSPC IFEFVYFARP DSTIDNISVY SSRVNMGTML GEKIKREWED HDIDVVIPIP ETSCDIALEI ARHMDLPYRQ GFVKNRYIGR TFIMPGQQER KKSVRRKLNA IGAEFKGKNV LLVDDSIVRG TTSEQIIEMA RDAGANKVYF ASAAPEIRFP NVYGIDMPTT NELIAHGRDV EEINNLIGAD GMIFQSLPDL IEAVRKENPS IKRFETSVFD GKYVTNDVNQ EYLDYITQLR NDDAKANRSK DIGTNLEMHN VCHP
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