Gene Spea_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1618 
Symbol 
ID5662015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1959484 
End bp1960749 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content45% 
IMG OID641236206 
ProductFolC bifunctional protein 
Protein accessionYP_001501478 
Protein GI157961444 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0285] Folylpolyglutamate synthase 
TIGRFAM ID[TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0841806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGTAG CACCAAAGTC AGGTGCTACG TTAAACCGCT GGTTAGATTT CTTATTGGCA 
ATTCACCCAA CTGAAATTGA TATGGGACTT GCACGGGTAT CAACTGTCGC TACTAGAATG
GAATTGAACC ATTTAGGCGA AACCAAAATA GTCACTGTTG CAGGCACTAA TGGTAAAGGC
ACTACCTGCG CCATGATCGA AGCTGCGTTA CAGCTATCAG GGAAAACGGT AGGCGTATAC
AGTTCACCGC ATTTACTGAA CTACAATGAG CGCGTGCGGA TTAATGGTAT TGATGCTACT
GATACAGCTT TAGTCGGTGC CTTCGAAGCC ATTGAAGCTG CTCGAGCCGA GATCTCATTA
ACCTTCTTTG AGTACGCAAC GCTAGCTGGT CTTTATCTCT TTAAAGCTGC CAAGCTTGAT
GTGGTATTAC TCGAGGTAGG TTTAGGTGGT CGCTTAGACG CAACCAACTT AATCGATGCA
GATATTGCAG TCGTGACTTC TATCGATCTT GACCATCAAG AGTACCTTGG TGATACGCGA
GAGTTGGTTG GCGCAGAAAA AGCAGGAATA TTTAGACAAG GGCGCCCTGC AATTGTAGGT
GAGCCTGATT GTCCACAATC GGTACTTGAT GCGGCCAATC GAGTCGGTGC ATCGCTTTAT
CGAGTTAATA GTGAGTTTAG CTACCAGTGC ACTAACGAGG ATTGGCATTT CAAAGGTCAG
CATTTCGATT TATCGCATTT GCCACTGCCA TATTTGCCTC AACCTAATGC CGCCACAGTT
ATTGCGGTAC TAGAGCACCT TTTTCCAACT ATTTCCGCCG AAATTATTGC TAAAGCCGTC
GGTAACACTC AGCTCGCTGG ACGTTTAGAA ACTCTTAATC CGTCACCTAA AGTTATAGTC
GATGTCGCCC ATAATCCTCA CGCTGCACGT TATTTAAAAT CACGTTTAGC TGCGATGGTA
AAAGGGCGTT TATTTGCACT TTGTGGCATG TTAAAAGATA AAGATGCTCG CTCGGTACTA
CTTGAGCTAT CAAGTGATGT TGATAAGTGG TTTTTATGCG ACTTATCGGT CCCACGTGGC
GCATCGGCAG CAGAGTTAAA CGCACTAATG CCGCAAGATG TAGACGCTGC CACTTATCAG
CAGATGAGCG ATGCTTGGCA AGCGATCAAA GCGCAATTGC ACAGCGATGA TATCGTTATT
GTATTTGGCT CATTTTACAC TGTTGCGGGT TTTAAAGAGT TGTTTAAGGG AGAGAAACTT
GTCTAG
 
Protein sequence
MPVAPKSGAT LNRWLDFLLA IHPTEIDMGL ARVSTVATRM ELNHLGETKI VTVAGTNGKG 
TTCAMIEAAL QLSGKTVGVY SSPHLLNYNE RVRINGIDAT DTALVGAFEA IEAARAEISL
TFFEYATLAG LYLFKAAKLD VVLLEVGLGG RLDATNLIDA DIAVVTSIDL DHQEYLGDTR
ELVGAEKAGI FRQGRPAIVG EPDCPQSVLD AANRVGASLY RVNSEFSYQC TNEDWHFKGQ
HFDLSHLPLP YLPQPNAATV IAVLEHLFPT ISAEIIAKAV GNTQLAGRLE TLNPSPKVIV
DVAHNPHAAR YLKSRLAAMV KGRLFALCGM LKDKDARSVL LELSSDVDKW FLCDLSVPRG
ASAAELNALM PQDVDAATYQ QMSDAWQAIK AQLHSDDIVI VFGSFYTVAG FKELFKGEKL
V