Gene Spea_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1613 
Symbol 
ID5662010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1953056 
End bp1954072 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content44% 
IMG OID641236201 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001501473 
Protein GI157961439 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0000186594 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCAGG AATTTAATGT TGTCGTATTA GGTGCATCGG GCGCAGTGGG TCAAACAATG 
ATTGAGATCC TCGAAGAGCG TAACTTTCCG GTTGCTAATT TATTTCCATT AGCCAGCAGT 
CGCAGCGCCG GTAATACGGT CAGCTTCCAC GGTAAACAGG TCGAAATTTT AGATGTAGAC 
ACCTTTGACT GGTCACAGGC CCAAATCGGT TTCTTCTCTG CAGGTGGTGA CGTATCAGCT 
AAATGGGCTC CCATTGCTGC TGAAAACGGT TGTGTTGTTA TCGATAACAC CTCTCACTTC 
AGATATGACA TCGACGTGCC ATTGGTGATC CCAGAGGTAA ACCCTGAAGC GATTGCCGAT 
TTCAGAAACC GTAACATCAT TGCTAACCCT AACTGTTCAA CCATTCAGAT GTTGGTTGCG 
CTTAAGCCTA TTTATGATGC ATACGGTATT TCGCGTATTA ACGTGGCGAC TTACCAGTCT 
GTATCGGGAT CGGGTAAGCA AGCTATTGAA GAGTTAGCAG GCCAGTGCGC TAAGCTTTTA 
CAAGGTTTAC CTGTAGAGCC TAAGACTTAT CCTAAGCAAA TTGCGTTTAA CGTATTGCCA 
CAAATCGATA AGTTTATGGA TAACGGCTAC ACCAAAGAAG AGATGAAAAT GGTGTGGGAA 
ACGCAGAAGA TCTTTGGTGA TGACAACATC GTTGTGAACC CAACGGCTGT GCGTGTACCA 
GTATTTTACG GTCACTCAGA AGCTATTCAC CTAGAGACAT TACAACCTGC TGATGCCGAA 
GACATTAAAT CCGTATTACG TGGTGCCGAC GGTGTAGAAC TATTCGAAGG TGATGAAGAT 
TACCCAACTG CGATAACAGA AGGCGCAGGT ACCGATCCTG TTTATGTTGG TCGTGTGAGA 
AAAGATATCT CCCATGAGAA TGGCATAAAC CTTTGGGTTG TATCAGATAA CATTCGTAAA 
GGCGCAGCAC TTAACAGTGT GCAAATCGCT GAAGTTTTGA TTAGAGATTA TTATTAA
 
Protein sequence
MSQEFNVVVL GASGAVGQTM IEILEERNFP VANLFPLASS RSAGNTVSFH GKQVEILDVD 
TFDWSQAQIG FFSAGGDVSA KWAPIAAENG CVVIDNTSHF RYDIDVPLVI PEVNPEAIAD 
FRNRNIIANP NCSTIQMLVA LKPIYDAYGI SRINVATYQS VSGSGKQAIE ELAGQCAKLL 
QGLPVEPKTY PKQIAFNVLP QIDKFMDNGY TKEEMKMVWE TQKIFGDDNI VVNPTAVRVP 
VFYGHSEAIH LETLQPADAE DIKSVLRGAD GVELFEGDED YPTAITEGAG TDPVYVGRVR 
KDISHENGIN LWVVSDNIRK GAALNSVQIA EVLIRDYY