| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1605 |
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| Symbol | |
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| ID | 5662002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1943701 |
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| End bp | 1945626 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641236193 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001501465 |
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| Protein GI | 157961431 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00154209 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTAA GTAAAATTCT CAAGCAGATC ATCGACAGTC AAACCACTAA AAATGTGGTC
ATTGGCCAGT TAGGTTTAGG TAGCATTACC AAACTTAAAC AGCTGATAAC TCTACTCGCT
CACCATAAAG ACAAGCAGCT TACGCTGAAG TTGTTTGTCG ATATAAGCGA TACCTCAGGT
ATCTTACTTG CTAATGAAGA GTTAACGACA CTGCTATGTC CTCAGGGGAG CATTTCTTTA
ACCGCAATAG AAGGCTGTCA GCGAGTCATC GTTAGTAATT GCAAACTCAC TATCGATTTT
TATCTCGGCC AATACCTCAC CCAACTGCAG GCTTTGCCTA TGGTTAACGA TGGTTTTGTC
GACGGCTGGC ACGTTACAAG TGATGCAGAC CAAACTCAGT TAAGGCAAAT ACTGTTTTGG
CAGCTAGCAA AATTAAGTAA AAATGATGCC CAGTTCAGCC TTGATGATAC ATTTACCGAA
GTTTCTCAGC TAGAACTCTA TACTCAGGCC GAGCAAGTGG GGCTTTATCG CTATGCTGAC
AACATTCCAG GAAATATACA GAGCGGCGAT GAGATCTGTT TTCAAGAACG AGCCGCGATG
CGTGCGCAGA GCCGAGCGTT GCAAGCCCCC TACCCAATCT GTTCTGCTGC TGTTACAACC
CATGCAACAT GCAGCAACCT AGGCATCGCC ATTATTGGCG GCGGCGTCGC CAGCGCGTGT
TTGGCTTTAT CCTTAGCCGA GCGAGGACAG CAAGTCACAC TTTTTTGTGA AGACCATGCC
CTAGCGCAAG CCGCCTCTGG CAACAAGCAA GGGGCGATCT ATCCGTTACT CACGCCAGAT
AACAACACCT TAAGCCAGTA TTTTCAGCAG GCCTACCTGT TTAGCTTACA AAGACTCAAG
AGCCTAGCAG CGCAAGGACA CCCAATTGAT TTTGACCTGT GCGGCGTAGT GCACACCGGG
CATGATGAAC GCAGCCGCAA GCGAGTGGCT AAGATTATTA ATGGTCAAAA CTGGCAGCCG
AGCATCGCCC GGGCAATTAC AGCCGAGCAG GCCTCTAGCA TTGCTGGATT GAAGATTGAT
GATGGAGGTA TTTTCTACCC TATGGGTGGC TGGGTGTCTC CACAAGACTT TACCCGAGCG
GCATTTAATC AGGCTAAGGC GATTGCTGGT GCATCACTTA AACTCAATAC ACAAATAACC
GATATTCACT ACAAGGATGG TGGCTGGGAG CTAACTAGTA ACACCGAACG CTTTGGCTCC
TTTAAGGCGC TTATCCTTGC TAACGGTAAG TCGATAACTC AATTCCCGCA AACCCAATAC
CTACAGGCTA CGGGATTTAG AGGTCAAGTC AGTCATGTGC CTTCTCGAGC TAAACTTTCA
AAACTTAGCA GTGTTTTGTG CGCCCATGGC TATATGACAC CGAGCAACAA TACATTACAT
TGCCTAGGCG CAAGCTACGT TAAAAATGCG CCAAATACTG ATTATTGCCC GAATGAGCAG
GTCGAAAACT TACATAAAAT TCAACATAGT TATGTTGGCC AAGAGTGGGT GGAAGACATT
GATGTATCTG GCCATAGCGC TCGTGTTGGC GTACGTATGG TAACCCGCGA TCATGCTCCT
ATGATGGGTC CCGCCCCCGA TATCGACTCA ATTATGACTC TATATCAAGA TCATCAGTTA
ACACCGCAGA GCCGTAAATA CTGGCAAAGC CATAATGCGC CAGTTCATCA AGGTCTGTAT
GTGCTGGGAG GATTAGGCTC GCGAGGCTTA AGCTCTGGGC CACTCGCCGC AGAATCGCTC
GCAGCGCAGA TTTGTGGCGA TTTAATGCCT ATTAGTCGTG ATTTTGTGGC ACTACTCAAC
CCTAATAGAA TGTGGATGCG AAAACTACTC AAAGGCAAAG CGCTAGAGGT GGGTGTCGAG
GTTTAG
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| Protein sequence | MTVSKILKQI IDSQTTKNVV IGQLGLGSIT KLKQLITLLA HHKDKQLTLK LFVDISDTSG
ILLANEELTT LLCPQGSISL TAIEGCQRVI VSNCKLTIDF YLGQYLTQLQ ALPMVNDGFV
DGWHVTSDAD QTQLRQILFW QLAKLSKNDA QFSLDDTFTE VSQLELYTQA EQVGLYRYAD
NIPGNIQSGD EICFQERAAM RAQSRALQAP YPICSAAVTT HATCSNLGIA IIGGGVASAC
LALSLAERGQ QVTLFCEDHA LAQAASGNKQ GAIYPLLTPD NNTLSQYFQQ AYLFSLQRLK
SLAAQGHPID FDLCGVVHTG HDERSRKRVA KIINGQNWQP SIARAITAEQ ASSIAGLKID
DGGIFYPMGG WVSPQDFTRA AFNQAKAIAG ASLKLNTQIT DIHYKDGGWE LTSNTERFGS
FKALILANGK SITQFPQTQY LQATGFRGQV SHVPSRAKLS KLSSVLCAHG YMTPSNNTLH
CLGASYVKNA PNTDYCPNEQ VENLHKIQHS YVGQEWVEDI DVSGHSARVG VRMVTRDHAP
MMGPAPDIDS IMTLYQDHQL TPQSRKYWQS HNAPVHQGLY VLGGLGSRGL SSGPLAAESL
AAQICGDLMP ISRDFVALLN PNRMWMRKLL KGKALEVGVE V
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