Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1601 |
Symbol | |
ID | 5661998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1940724 |
End bp | 1941431 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641236189 |
Product | hypothetical protein |
Protein accession | YP_001501461 |
Protein GI | 157961427 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00766974 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATAAGA GTGTTATTAC TAATCTGCTT GCGGCCATTC TTGTTGCTGT AGGTTACTTG TTTGCCTTAC CAATCGTACT GACCGTCGGA CTCTTTGCAC TATCTGGGGC GGTGACTAAC TGGTTAGCTA TTCATATGTT GTTTGAGAAG GTGCCAGGTT TATATGGCTC AGGTGTTATC CCATCTCGAT TCGAAGAGTT TAAACAAGCT ATCGCGAACT TGATGATGAA ACAGTTCTTT ACTGAAGAAA ATATTGACCG GTTTTTATCG GGTGAAGGTG GTATTGAAAA GCAACTAAAC TTACAACCGG TTATCGATAA TATTGATTTA TCGCCCGCAT TTGATGCCTT GGTGACGACC GTTGAGCAAT CCTCATTCGG CGGGATGTTA GCTATGTTTG GTGGCTCTGA CGCCATAACG CCGCTACGTG AACCTTTTAT TGAGAAAATG AAGAGCTCTT TGAGTGAAAT CGCCCAAAGT GAAGACTTTT ATGAGTTACT AAAAGCCGAA CTAGAGCAAC CCAATATGAT TGCGGATATG CGCGCAAAAG TGGAAGAGAT TGTGACTCAA AGACTCGATG AGTTAACACC GCAACTTGTT AAAGAAATCG TGCAAGAGAT GATCCGTGAA CACCTTGGTT GGTTAGTGGT GTGGGGCGGT GTCTTTGGTG GCTTAATAGG CCTAGCTGCG GCGCTTATTC AGGGGTAA
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Protein sequence | MNKSVITNLL AAILVAVGYL FALPIVLTVG LFALSGAVTN WLAIHMLFEK VPGLYGSGVI PSRFEEFKQA IANLMMKQFF TEENIDRFLS GEGGIEKQLN LQPVIDNIDL SPAFDALVTT VEQSSFGGML AMFGGSDAIT PLREPFIEKM KSSLSEIAQS EDFYELLKAE LEQPNMIADM RAKVEEIVTQ RLDELTPQLV KEIVQEMIRE HLGWLVVWGG VFGGLIGLAA ALIQG
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