| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1538 |
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| Symbol | |
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| ID | 5661935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1872055 |
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| End bp | 1873431 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641236126 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_001501398 |
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| Protein GI | 157961364 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00324731 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAGTG TATTCGACAT GTTCAAAATC GGCATCGGGC CGTCAAGTTC TCATACTGTA
GGTCCAATGA AAGCGGGCAA CGTTTTTATT GAGCAACTGC AGCAGTTAAA TATTCTCGAT
AGCGTTGATG AATTACGTTC AGAGCTGTTT GGCTCTTTAG GGCAAACAGG GGTAGGTCAC
GGCACTGGCA AAGCCGTCAT TTTAGGGCTT ATGGGAGAGG CGCCAGAATC AGTAGATACT
GACAGCATTG ATGCCATTTT AGAGCAAGTA AAAAACACCG GGCTGCTAAC ACTTGCAAGC
GGACGAAAAG TACTCTTTAC TCGCGCAGAC GGTATCACCT ACCACAGGCG CAAAAGCCTG
CCAGCTCATG CCAATGCCAT GACCTTATAT GCCTATAAAG ACGGCGAGTG CATCTATGAT
CGCACCTATT ACTCTGTAGG GGGTGGCTTC ATTCTCGATG AAGATGAAAT CAAAGCACAA
GATGCATCCC CGGCAGCACC GATTCAATCA GCCCCTTTTG ACTTTGATTC AGCGCAACAA
CTGCTTGAGC TCTGTACTGA AAATGGTTTC AGCATTTCAT CACTTATGAT GATGAATGAA
CTTAGCATTG CCGACGCCGA CGAGATCAAT GATCAATTGT GGCAAATCTG GCAAACCATG
AAGACCTGTG TTGAGCGCGG TTACCAAAAG GAAGGCATCC TTCCTGGAGG CTTAAAACTG
AGACGCCGTG CACCTTCGCT ACATCGTCGT TTAAAAGCCG AAGGCAAGAA CTGCGTCGAT
CCGCTAACCG CTATGGATTG GGTCGACCTA TTTGCCCTAT CAGTTAACGA GCAAAATGCC
GCTGGCGATC GTGTTGTTAC CGCACCGACT AACGGCGCAG CAGGGATTAT TCCTGCGGTA
TTATGTTATT ACGACATGTT CGTTCAAGAA GTTGACCAAG ACGTTTGCAA TCGCTATCTA
CTGACGGCTG CTGCCATTGG TATTCTTTAT AAGAAGAATG CTTCTATCTC TGGCGCTGAA
GTGGGTTGCC AGGGGGAAGT TGGCGTAGCT TGCTCTATGG CTGCAGCGGC TCTGACTGAG
ATCATGGGCG GCACTGTTGA ACATGTTGAG AATGCAGCTG AAATCGGCAT GGAGCATAAC
CTAGGCTTAA CTTGTGACCC TGTAGGCGGC CTTGTACAAG TTCCTTGTAT TGAACGTAAT
GCTATGGGGG CGGTAAAAGC GATTAACGCT TCACGTATGG CAATGCGCGG CGATGGTAAC
CATAAAGTCT CACTCGATAA GGTGATTAAG ACCATGATGG ATACAGGTAA AGATATGCGT
AGTAAGTATA AAGAGACTGC CAAAGGTGGT CTTGCGGTGA ATATCGTCGA GTGCTAA
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| Protein sequence | MISVFDMFKI GIGPSSSHTV GPMKAGNVFI EQLQQLNILD SVDELRSELF GSLGQTGVGH
GTGKAVILGL MGEAPESVDT DSIDAILEQV KNTGLLTLAS GRKVLFTRAD GITYHRRKSL
PAHANAMTLY AYKDGECIYD RTYYSVGGGF ILDEDEIKAQ DASPAAPIQS APFDFDSAQQ
LLELCTENGF SISSLMMMNE LSIADADEIN DQLWQIWQTM KTCVERGYQK EGILPGGLKL
RRRAPSLHRR LKAEGKNCVD PLTAMDWVDL FALSVNEQNA AGDRVVTAPT NGAAGIIPAV
LCYYDMFVQE VDQDVCNRYL LTAAAIGILY KKNASISGAE VGCQGEVGVA CSMAAAALTE
IMGGTVEHVE NAAEIGMEHN LGLTCDPVGG LVQVPCIERN AMGAVKAINA SRMAMRGDGN
HKVSLDKVIK TMMDTGKDMR SKYKETAKGG LAVNIVEC
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