Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1532 |
Symbol | |
ID | 5661929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1861254 |
End bp | 1862582 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641236120 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_001501392 |
Protein GI | 157961358 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000132104 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCTA CGAAAACTAA AAAACTCGGC CTCACGAGTA AGATAATTAT CGGTATGTTT ACCGGTATTA TTCTCGGACT CTTACTACGC AATCTGTTTC CAGAGAGTGA CTTTATCAAA GAGTACATCA CTGAGGGTGT GCTAAATGTA ATCGGTACTA TCTTTATCTC AAGCTTGAAA ATGCTTGTTG TTCCTCTTGT CTTTGTTTCA TTAGTCTGTG GTACTTGTTC GCTAAGTGAA CCCTCTAAAG TAGGTCGCTT AGGTGGCAAG ACCATCGCGT TTTATCTATT CACCACAGCC ATTGCCCTTT CAATGGCGAT TCTAGTTGCC ATTGCTATCC ACCCTGGCAA TGCCAGTATG GTGACTGAAG GAATGCAGTT TGACGTCAAG CAGGCCCCAA GCCTTTCTGA TGTACTTATT AATCTTGTGC CTACCAACCC ACTGCATGCG ATGAGTGAAG GTAATATGCT GCAGATCATC ATCTTTGCGG TGATCTTTGG TTTTGCTATC TCGCATATTG GTGAACGTGG TGCGCGTGTC GCAGCACTGT TTAACGACCT TAACGAAGTG ATCATGCGTG TTGTAACACT TATCATGCAA CTTGCTCCTT ACGGCGTGTT TGCCCTGATG GCAAAATTGG CGCTCACACT GGGGATGGAA ACCTTTGGCA GTGTCGTTAA ATACTTCTTC GTAGTACTAG GTGTGTTACT TGTTCATGCA TTCGTGGTGT ACCCGGTGCT GCTTAAAGTG TTCTCTGGGC TCAACCCATT CACCTTTATC CGTAAAATCC GTGACGTACA GCTATTTGCA TTTAGTACAG CGAGTTCAAA CGCGACGCTG CCTGTGACTA TTGAGACTGC AGAGCACCGT ATGGGCGTGG ATAATAAGAT TGCCTCTTTC ACCCTGCCAC TTGGTGCGAC TATTAACATG GATGGCACCG CGATCATGCA AGGCGTTGCG ACCGTCTTTA TTGCCCAAGT CTTTGGTATC GAGCTAACAA TTACCGATTA CGCTATGGTT GTTGTTACAG CAACGCTTGC CTCTATCGGT ACTGCCGGTG TACCTGGTGT GGGTCTAATC ATGCTTGCCA TGGTACTGAA CCAAGTCGGT CTGCCTGTTG AGGGTATCGC GCTGATTATT GGTGTAGATA GACTGCTGGA TATGGTGCGT ACAGCGGTTA ACGTAACCGG TGATACAGTA GCAACTGTGG TGATTGCTAA ATCTGAAAAT GAGTTTAACG AAGAGATCTT CAATGATACT CAAGCGGGTA AAGTCGCTCC AGGTTTCAAC GCTCAAGTTC ATGCTGAAGA AATGAAGTTG AACAAGTAA
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Protein sequence | MSATKTKKLG LTSKIIIGMF TGIILGLLLR NLFPESDFIK EYITEGVLNV IGTIFISSLK MLVVPLVFVS LVCGTCSLSE PSKVGRLGGK TIAFYLFTTA IALSMAILVA IAIHPGNASM VTEGMQFDVK QAPSLSDVLI NLVPTNPLHA MSEGNMLQII IFAVIFGFAI SHIGERGARV AALFNDLNEV IMRVVTLIMQ LAPYGVFALM AKLALTLGME TFGSVVKYFF VVLGVLLVHA FVVYPVLLKV FSGLNPFTFI RKIRDVQLFA FSTASSNATL PVTIETAEHR MGVDNKIASF TLPLGATINM DGTAIMQGVA TVFIAQVFGI ELTITDYAMV VVTATLASIG TAGVPGVGLI MLAMVLNQVG LPVEGIALII GVDRLLDMVR TAVNVTGDTV ATVVIAKSEN EFNEEIFNDT QAGKVAPGFN AQVHAEEMKL NK
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