Gene Spea_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1519 
Symbol 
ID5661916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1846596 
End bp1847351 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content47% 
IMG OID641236107 
ProductN-acetylmannosamine-6-phosphate 2-epimerase 
Protein accessionYP_001501379 
Protein GI157961345 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3010] Putative N-acetylmannosamine-6-phosphate epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTGG TAAATAGAGA GTTAGAAAAG CAATTATTAT TGTCGTTGAA GCACTCTTTG 
ATTGTTTCTT GTCAGCCAGT AGATGATGGT CCTATGGACA AGGTCGAACA CGTTGTGGCG
ATGGCGTTGG CTGCCGTGAA TGGTGGAGCC AAAGGGCTAA GAATCGAAGG TGTCGAGAAT
GTACGGGCGG TGGCCAAGGT AAGCCCTGTG CCAATTGTCG GTATTATAAA AAGAGATTTA
GCTGATAGCG CTGTGCGTAT CACGCCATAT GTTGATGATG TCAATGCGCT AGCAAAGGCT
GGAGCAAGTA TTATTGCATT TGATGGAACA GACAGGAGGC GTCCTGCATC AATGTTACAG
CTATTAGATG CAATCCACAT GTCAGGTTGT GTTGCTATGG CAGATTGTGC TGACTATGAG
GTTGGCTTAA TGCTGGCTCA ACATGGCTGC ACTTTTATTG GCAGTACATT GTCTGGTTAC
ACAGATAACT CAGCCCCTCC TTTTGAGCCT GATTATAACT TGGTGAGCCG CTGGGTAAGT
CAGGGGCTGA ATGTGATTGC AGAAGGGCGT TATAACTCAC CTGAGCGGGC TGCATATGCC
ATAGGGCTTG GTGCGTTTTC AGTTACTGTT GGATCCGCAA TCACGCGTGT GGAACACATT
ACTCAGTGGT TTGTCGCTGG TGTTGAAGCC GGTGGTAATA CTAGTACCGT CGAGAATGAA
AATGCCCAAG ATGGTATAGG AGCCTTGGCT ACATGA
 
Protein sequence
MSVVNRELEK QLLLSLKHSL IVSCQPVDDG PMDKVEHVVA MALAAVNGGA KGLRIEGVEN 
VRAVAKVSPV PIVGIIKRDL ADSAVRITPY VDDVNALAKA GASIIAFDGT DRRRPASMLQ
LLDAIHMSGC VAMADCADYE VGLMLAQHGC TFIGSTLSGY TDNSAPPFEP DYNLVSRWVS
QGLNVIAEGR YNSPERAAYA IGLGAFSVTV GSAITRVEHI TQWFVAGVEA GGNTSTVENE
NAQDGIGALA T