Gene Spea_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1508 
Symbol 
ID5661905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1827540 
End bp1830386 
Gene Length2847 bp 
Protein Length948 aa 
Translation table11 
GC content48% 
IMG OID641236096 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_001501368 
Protein GI157961334 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.66847e-06 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATATC AGGTGTTGGC CAGAAAATGG CGCCCTGCCA CTTTTGAGCA AATGGTTGGT 
CAATCTCATG TTTTACATGC ATTAACCAAT GCGCTTACTC AGCAAAGATT GCACCATGCT
TATCTGTTTT CCGGTACTCG CGGTGTGGGT AAAACCAGTC TTGCACGTCT TTTTGCTAAG
GGTTTAAACT GCGAACAAGG TGTCACAGCC ACGCCATGTG GCCAATGTTC AGCGTGCGTT
GAAATTGCCG AAGGCCGTTT TGTCGACTTG ATTGAAGTAG ATGCCGCCTC AAGAACTAAA
GTCGATGACA CCCGAGAACT GCTCGATAAC GTGCAGTATA GACCGAGCCG TGGTCGCTAT
AAGGTGTACC TAATCGATGA AGTGCACATG CTTTCTCGCA GCAGTTTTAA TGCCTTGCTT
AAGACGCTTG AAGAACCCCC TGAGCACGTA AAATTCTTAC TGGCGACAAC CGATCCACAG
CGCTTGCCTG TGACGGTTCT CTCTCGTTGT TTACAGTTTA ATCTTAAGAG TCTGACTCAA
GATGAGATTG GCGCGCAGCT AAACCATATT TTAACGGCAG AGCAACTGAC TTTTGAAGAG
TCAGCTTTAA CCTTGCTTGC TAAAGCGGCG AACGGCAGTA TGCGTGATGC CTTGAGCTTG
ACCGATCAAG CCATTGCATT CGGTGCCGGA CAAGTCAAAC TTGAGCAAGT GCAAACCATG
CTCGGTAGCA TCGATGAAAA GCATGTTATT GCACTGCTTG AAGCACTCGC TAAAGCCGAT
GTGATGGACT TGATGCGAGT GACGGCCAAA GTGCTGTCAT TTGGCGCAGA ACCAGAAGAG
GTACTGCGCA GCTTACTTGA GTTGTTGCAC CAAATTACCT TAACTCAATT TGCACCAGCA
GCCGCGCAAA TGTCACTGTA TAGCGAGCAG ATAAAAGCGT TTGCACAGCA GCTATCAGCA
GAGCAGGTAC AGCTTTACTA TCAGTTGCTA CTGACAGGGC GTAAAGACTT ACCCCATGCG
CCTGATCCAA AGTCAGGACT CGAAATGGCA CTGCTTCGAG CGGTGACCTT CGTACCAGAA
AAGCCTGTGA CGCGCTGGGC AGTGGAGTCG AAAGCTGAGG TGAGTATACC GAAAGCCGAT
AAGACTCAAG CTTTAGCCGC TCAAGCTGCT GTAGCTGTTG CGCCAGTTAA TCCAGTATCA
ACAAGTCACG CTCAAGCGGC GGTAGACTCA GCTCCTGCTG CTTTAAACCC AGTAGTCTCA
ACTTCGGCGA ACGCTTCAGC TCATGTGACG GAGCCGAACA GCGAGCAATT AGCCCAAGAT
AGTGCGGCGT TAGAAGAGCC TGATGCAAGC CTTAACAGCG AGATGGCCAT GATAATGAGC
CAGGCTCAGA GTCAGGGCTT TAATCAAGCT GAAATGACGA CAGTGGTTGA TACAGAGGTA
GCTACCGCAG ATGTTCCTGA AGTAGCTGAT AATGTTGAAA AGGCGAGTGA GACTTCAACA
CTAAAAGAGC CTTCAGCGCA ATTAGAGTCT TCACTTCAGG TTGAGCCTTC AGCTCAATCA
GCTCAATCAG AGCATTCACA TCAAGCAAAG TCTGAGCCTC AAAGTCTTAC TGAGACTGAG
ACTACTCCAG CTCCTGAATT TAAGTCTGAG TCTGAGAATT TTACAGCCAG AGAACAAGAT
AGCACTTCCA GCGATAACGC GAGCTATGCA GATTACAGCG ATGATGATTT AGCATCATAT
GCCGATTATG CCGGAGCCTT CGATGGCTCT AGCCATGATT ACAGTTTCGA TAATGGTAAC
GATCTCAGTT ATCAGGTCAA TCAAGACCCA TCTGCGCTAT CTCAAGGTGA TGAAGCCGTT
GAGCAGACTC AATCAGCGAC TTTGCCTGTT AGCTCAACGA CCGATGCAAG TTCTGTTTCG
AGTGATGACA TTTTGGACGC AGTGCTAGCA GCCAGAGCCA GTTTACTCGA TGGACTAGGA
GAGGATGATC CTAAGGAGGA ATCCTCAAAA AAGTCTTTAG AGGTTCGTAA ACCTTTTTCA
CCTCCGGCGC GAAAGCAGCC TGATGTAAAG AGTAGCGATA TCTCTTCGCC TGATAGCCTT
GAATCTAGAG AAGATCAAAT TCAGGATCTA GCTGAGGACA ATGAGTCTGA AATTATCGAC
AGGCCGCCTT GGGAAGAGCC CCACGAGCAG GATCCTTGTG CGCGATTTGA TGACCCGAAT
GCTGAGACCC AGGTCAGTGA GGCTAAAACC ACACATGAAG AAGTAAAGCA TGCCGAATTT
AATTCTGAGC AAGATGAGGC GAGGGCTGAG CAAACAGCAG TTGATTCATC TCCTGTTCAG
GATGCTGAGC TAAACTTACC AGTATTACCC AGTGGTGAAT TGACAGGAAA TGAAGTGGAC
CTTAAATGGT ATCGCTTTAT GTCAGAGCTT GAAGTTGGCG GCCGAGTGCG TCAGTTGGCG
GTGAACTCAG TCTGCCATCA GTTTGCGCAA CCCTTGTCAC TCTTGCTTAA ACCCGATCAG
AAGCATTTAG CTGCGGATGT GGCTATTAAG CAGTTAGAAG AGGCTATGAG TGACTCTCTA
GGTGAGCAAT GCAGTGTGAG TGTGACAGTT GGCGCCGATC ACGATAGAGA AACGCCACTT
GAAGTCAGGC GACGCTTCAA CAAAGAGATC TTAGTGCAGG CACATCACGA TCTTATGACC
GATGATAATG TGCGCTGGCT AACCCAGAAT ATGGGGGCTC AGATGACGGA CGATTCGTTA
ACTTATGCAC CAGAGCTATT AGTACAGAAA GGAAAACAGA TTGAGTTGAT CGATATTGCG
AACTTTAAGC GGTTAACTGA GTCATAA
 
Protein sequence
MSYQVLARKW RPATFEQMVG QSHVLHALTN ALTQQRLHHA YLFSGTRGVG KTSLARLFAK 
GLNCEQGVTA TPCGQCSACV EIAEGRFVDL IEVDAASRTK VDDTRELLDN VQYRPSRGRY
KVYLIDEVHM LSRSSFNALL KTLEEPPEHV KFLLATTDPQ RLPVTVLSRC LQFNLKSLTQ
DEIGAQLNHI LTAEQLTFEE SALTLLAKAA NGSMRDALSL TDQAIAFGAG QVKLEQVQTM
LGSIDEKHVI ALLEALAKAD VMDLMRVTAK VLSFGAEPEE VLRSLLELLH QITLTQFAPA
AAQMSLYSEQ IKAFAQQLSA EQVQLYYQLL LTGRKDLPHA PDPKSGLEMA LLRAVTFVPE
KPVTRWAVES KAEVSIPKAD KTQALAAQAA VAVAPVNPVS TSHAQAAVDS APAALNPVVS
TSANASAHVT EPNSEQLAQD SAALEEPDAS LNSEMAMIMS QAQSQGFNQA EMTTVVDTEV
ATADVPEVAD NVEKASETST LKEPSAQLES SLQVEPSAQS AQSEHSHQAK SEPQSLTETE
TTPAPEFKSE SENFTAREQD STSSDNASYA DYSDDDLASY ADYAGAFDGS SHDYSFDNGN
DLSYQVNQDP SALSQGDEAV EQTQSATLPV SSTTDASSVS SDDILDAVLA ARASLLDGLG
EDDPKEESSK KSLEVRKPFS PPARKQPDVK SSDISSPDSL ESREDQIQDL AEDNESEIID
RPPWEEPHEQ DPCARFDDPN AETQVSEAKT THEEVKHAEF NSEQDEARAE QTAVDSSPVQ
DAELNLPVLP SGELTGNEVD LKWYRFMSEL EVGGRVRQLA VNSVCHQFAQ PLSLLLKPDQ
KHLAADVAIK QLEEAMSDSL GEQCSVSVTV GADHDRETPL EVRRRFNKEI LVQAHHDLMT
DDNVRWLTQN MGAQMTDDSL TYAPELLVQK GKQIELIDIA NFKRLTES