Gene Spea_1487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1487 
Symbol 
ID5661884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1809342 
End bp1809803 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content45% 
IMG OID641236075 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001501347 
Protein GI157961313 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR02010] iron-sulfur cluster assembly transcription factor IscR
[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.540059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTA CATCGAAAGG TCGGTACGCA GTAACTGCAA TGTTAGACGT TGCCATGCAT 
TCAACCAATG GTCCTGTACC ATTGGCCGAT ATTTCCGAGC GCCAAGGGAT CTCTCTATCT
TACCTCGAAC AACTTTTCGC AAAACTCAGA AAAAACGGCT TGGTCTCAAG CGTACGTGGC
CCAGGTGGTG GATATCGCCT TGGGACAGAT GCTTGCGATA TTTCCGTTGG GATGGTTGTA
CGTGCGGTTG ATGAGTCTGT TGATGCAACA CGCTGCCAAG GTCAAGGTAA CTGCCAGAGT
GGAACACGAT GTTTAACCCA TTCTCTCTGG GGAGATTTAA GTAGTCAGAT TTCTGATTTC
TTAAATGGCA TATCATTAGC AGGATTGATG CATAAAAGAG ATGTGCAGTT TATCTCCGTT
AAACAGGATA AATTGCAGCA GGAACAAAGG CTAAGTATTT AA
 
Protein sequence
MKLTSKGRYA VTAMLDVAMH STNGPVPLAD ISERQGISLS YLEQLFAKLR KNGLVSSVRG 
PGGGYRLGTD ACDISVGMVV RAVDESVDAT RCQGQGNCQS GTRCLTHSLW GDLSSQISDF
LNGISLAGLM HKRDVQFISV KQDKLQQEQR LSI