Gene Spea_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1444 
Symbol 
ID5661841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1758685 
End bp1759110 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content43% 
IMG OID641236006 
Producthypothetical protein 
Protein accessionYP_001501304 
Protein GI157961270 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.22592e-11 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAGAA AAAAAAGAAG CGGCGGGTTA ACATTTATTG CTCAAGGCAC CAAGTTTACT 
GGTGAAACTG AGTTTTCAGC TGAAGCACTT ATTGCTGGCG AGCTCTTTGG AAAAGTAAGT
TCCAGTAGCA ATATCACTAT CGAACAGGGT GGCCTTATCG ATGGTAAACT TCACTGTGCT
GAGCTAAGAG TCTCAGGTAC TTTCCGCGGT AAACTGACTT GTGAAAAGCT TAACATTACC
AGCACGGGTC TTGTCGATGG TGAGGTGAAC TGCCAGTCGA TGGAAATTTT TGAAGGAGGT
CAATTTATCG GAATGCGCGT AAGAGACGAT ATTGCCTTTT TACCCTCAAA TTCAGCACCT
AAACAGGAAC GCAGCAAATC GGCTAAAGAA GAAACGATTG AAGATGCTGA ACTCAGTATG
AGTTAA
 
Protein sequence
MFRKKRSGGL TFIAQGTKFT GETEFSAEAL IAGELFGKVS SSSNITIEQG GLIDGKLHCA 
ELRVSGTFRG KLTCEKLNIT STGLVDGEVN CQSMEIFEGG QFIGMRVRDD IAFLPSNSAP
KQERSKSAKE ETIEDAELSM S