| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1424 |
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| Symbol | |
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| ID | 5661821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1729753 |
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| End bp | 1731924 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641235986 |
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| Product | WecB/TagA/CpsF family glycosyl transferase |
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| Protein accession | YP_001501284 |
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| Protein GI | 157961250 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1922] Teichoic acid biosynthesis proteins
[COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.84007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA CCAACTTGAA TACAGAGTCA AATGGCCGGT CGAGAGTAGA GTCGAATACC
ATCTCTAATA AAGAGCCTAA GCCACAAGCC ACTCATTATG GTTATTCATG TTTCAGCATT
CGCTGCTTCG ACTTTATCAG CGCCTTGTTA ATGCTATCGC TTACATCCCC CTTATTCTTA
TATGCATATC TTAGAAGCGC TTTGAGCCAA CCCCGTGCAT TTGAAACTGT GTATATTCAC
GGTCTCGATG AGCAGGTAAT AGGCTTAAAA CAGTTGTCCT ATTCGGGCTG GTTTAAAAAA
CTACCTGTGT TGCTCAGCCT ATTAAAGGGA GAGCTTTCAA TCTTAGGCAC AGTGCAAACT
TTTGCACTGC CTAAAATTAG CGACAAGGCC ACCAGCAAGC ACACTCATAC AAGAGCCCAT
ACAAGAGCTC ATACAAGAGC TAAAAAGGCC TATCGTATAA AACCTGGCTT GACCTCTATC
GAGCAGATGA ATGCTGCTAC AGGTCTGCGT TTTGAGGCTG CACCAAGCTC ACTCGCTAAA
GCACATCGTA GCCTAGCCCG CTATCAGCTC GCTCTGCTAA GACTTGTAAT TGTCTATATC
GTCACCCGCA TCGCCTTTAA TAAGCCAAGC AGAAACACAC CTAAGATCTC AGTATTTGGC
ATCCCGTTCG ATAACTGGAC CATGAAACAA CTATTAGACG AAGTGTTACA ACAGTGCCAG
CATCGAGCAC AACCTATGCA GCAGTATGCC TTTATCAATG CCGACTGCCT CAACATCAGC
ACTAAAAATG AGTCTTACCG TCAGTGCCTA AAGCAGACCA AGCACATTTT TGCCGATGGC
ATAGGAGTGC GCTTAGCCTG TATCAGTAAA GAGAAAGCCC TGCAAGATAA TCTCAATGGC
ACCGATATGT TTCCACGCCT GTGCCAGCTT GCTGCAAATA ATAATCTGTC TATCTTTATG
TTGGGCGGCG CCCCTGATAT TGCCCAATCA GCTGCAGACA ACATGCAACA GCGGTATCCA
AAGCTCAAAA TTGCAGGCTG CCATCATGGT TATTTTGATA GCGAGTCAAG TAGTGAATCA
ATTAACGAAG AGAACCAAGA TGTTATAGAT ACAATCAACC AGTCTAATGC CGATATTTTA
CTGGTGGCCA TGGGAGCGCC CAAACAAGAG CTGTGGCTAC AAGCCAATAA GCAACATCTG
ACCTGCTCTA TCGGGATTGG GGTGGGAGGT CTCTTCGATT TTTATGCTAA GCGCATTAAA
CGTGCGCCGT TGTGGCTAAG ACAGATGGGT TTTGAGTGGT GCTACCGTTT ACTGCAAGAG
CCGAAAAGAA TGTGGAAACG CTATATTATT GGTAACCCGA GCTTTCTCTA TCGAGTTTGG
CGTGAAAACC GTCAACTAAA GAAGTTACTG GTTAACTCAC AAACATCGAC AGCAAACAAT
AATCACAGCC TAACAAAACT GCAGCTTCAA ACCGAATTAA ATAAAGCGAC GCTTAAAAAC
CGAAAAGTCC CTCAATTTGA CGTTAGGCAA GCCAATCTTC GCCGCGCAAT GTTTAATCTC
AATAGGCATT TCGCTCGCAG CTGCAAGCGC TTGCTCGACA TCATAATCTC GGCTTGTCTT
TTGATCTTGT TATCACCATT GCTGTTAAGC ATTGCAGTGC TTATCCGCTT GGAGTCTAAA
GGTGCTGCTT TATTCAGCCA ACCAAGAGCG GGCCTCAATA ATCGTTCGTT TACCATGTGG
AAATTTCGCT CCATGTACCA GGATGCTGAG CAGCGGCTGG CAACATTAAA CCACAGTAAT
GAAATGCATG GAGGGGTCAT TTTTAAGATG AAGAACGATC CTAGGATCAC TTTAGTCGGA
CGGTTAATCC GTAAAACCTC TATCGATGAG CTGCCCCAGT TATGGAATGT ATTAAAAGGT
GACATGTCGT TAGTCGGCCC ACGTCCTGCG CTAGTCAGTG AGGTTAAACA GTACAAGTTA
CATCATAGAA ACCGTTTAGT GATAAAGCCT GGGATCACCT GCATTTGGCA AGTCTCAGGC
CGTTCAACTA TTCCGTTTGA GCAGCAAGTT GAACTCGATA TCGATTATAT CTACCAACAG
TCATTTTCTG CCGATCTGTT ACTGCTACTG AAAACAATCC CCGCAGTTAT TTTTGCCCGT
GGCGCGTATT AA
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| Protein sequence | MKNTNLNTES NGRSRVESNT ISNKEPKPQA THYGYSCFSI RCFDFISALL MLSLTSPLFL
YAYLRSALSQ PRAFETVYIH GLDEQVIGLK QLSYSGWFKK LPVLLSLLKG ELSILGTVQT
FALPKISDKA TSKHTHTRAH TRAHTRAKKA YRIKPGLTSI EQMNAATGLR FEAAPSSLAK
AHRSLARYQL ALLRLVIVYI VTRIAFNKPS RNTPKISVFG IPFDNWTMKQ LLDEVLQQCQ
HRAQPMQQYA FINADCLNIS TKNESYRQCL KQTKHIFADG IGVRLACISK EKALQDNLNG
TDMFPRLCQL AANNNLSIFM LGGAPDIAQS AADNMQQRYP KLKIAGCHHG YFDSESSSES
INEENQDVID TINQSNADIL LVAMGAPKQE LWLQANKQHL TCSIGIGVGG LFDFYAKRIK
RAPLWLRQMG FEWCYRLLQE PKRMWKRYII GNPSFLYRVW RENRQLKKLL VNSQTSTANN
NHSLTKLQLQ TELNKATLKN RKVPQFDVRQ ANLRRAMFNL NRHFARSCKR LLDIIISACL
LILLSPLLLS IAVLIRLESK GAALFSQPRA GLNNRSFTMW KFRSMYQDAE QRLATLNHSN
EMHGGVIFKM KNDPRITLVG RLIRKTSIDE LPQLWNVLKG DMSLVGPRPA LVSEVKQYKL
HHRNRLVIKP GITCIWQVSG RSTIPFEQQV ELDIDYIYQQ SFSADLLLLL KTIPAVIFAR
GAY
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