| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1408 |
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| Symbol | |
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| ID | 5661806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1709809 |
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| End bp | 1711257 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641235971 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001501269 |
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| Protein GI | 157961235 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACTTA AAAGCAAAGC CCTTTATGGC GTAGCTTGGA GTATATTTGA TAAACTTGTT
AATCATTTGG GGAGTTTTCT ACTCCTTATA TACTTATCGA GGGTATTAAC TCCGTCAGAT
TTTGGTTTGA TTGCTATGCT TGCCGTTTTT TTGGCGGTGG CTCAATCTCT TACGGATTCA
GGTTTCTCGC AAGCATTGAT TCAGAAAAGC AATAGTGCTA CTGAAGATGA TTTTTCTACA
GTTTTTTATG TAAATTTAAT ATTATCTTCT TCTTTATATT TGTTGCTTTA TATCTCGGCC
CCTACTATAG CAGACTTTTA TAGTAGTCCG GTTTTAGTTG ACTTATCACG TATACTTTTT
ATTATAGTTA TTATCGATGC CATAGCCTTG GTTCCTCGCT CTAAGTTAGC TATAGTTCTT
GATTTTAAAA CTCTTGGTTT AGTGAATAGT GTTTCTACAA TAATTAGTGC TTTAGTCGCC
ATTATTATGG TTAATAGTGG GTTGGGATAT TGGTCTCTTG TTGGACTGAG TTTAACTAAA
TCAATAATAA CATCTTTATT GTTAGTAATA GTTACTCGAT GGTGTCCGAA ACTTAAATTC
TCAAGAGTAT CCTTTTCAAG CTTATTTTCT TTCAGTTCAA ACTTATTGAT TGCGGGTACG
GTAGCGAGAA TTGTTCAAAA TTTGTATGCC GTTATGATTG GTCGGTATTT TAATGCAACT
CAAGCCGGTT ATTTTCAGCA AGCATTTAGT TATACTGAAA TGCTTTCATC TGCTGTAACT
TCTGTCACGC AAGGGGTAAG TTATCCTTTG ATGACTTCAA TCAAGGATGA TAGAGATCGA
TTGATCGGAA TTTACAAGAA AGTGATGGGG GTTATAACAT TTGTAGCATT TCCAGTTTTT
ATAGGATTCG CGGCAGTCGC TGAAGAGTTT GTCTTAATTT TATTAGGTGA GAAGTGGAAA
GAAGTAATTC CTATTTTGAT GGTTATGTCT TTATCTCGCT TATTCACTCC GATAAGTAGC
TTGAATTTAG GTATTCTAAA TGCAAGTGGC CGTTCAGATT TATTTCTTAA AACGGACTTA
AGTAAGGTCC CTATGGTTGT TGGAGCGTTA TTTATCGCTA TTCCTTATGG GATTTTTTGG
GTAGCTTGCG CGCACCTCAC GACTACTTTC ATTTCCTTTT TTATCAATGC ATATTACCCG
GGTAAAATGT TTGGATTTGG AGCTTTGAAG CAAATAAAGC AAATGTTGCC TATAGCAGGT
ATTTCAGTAG TAATGTTTTT TAGCATATAC TTTATTAAGT TCGACAACTT ATTGTTTCAA
TTCATAATTA AAATTATTGT CGGTATCTTC ATCTTCGTGC TCTTTTGTTT AATATTCAAA
CCGGCCGCAT TCATAGATAT TAGGTCTTTA TTAGGTGGAG GAAACAAATC TGGGAGAGGT
TTAGTGTAA
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| Protein sequence | MSLKSKALYG VAWSIFDKLV NHLGSFLLLI YLSRVLTPSD FGLIAMLAVF LAVAQSLTDS
GFSQALIQKS NSATEDDFST VFYVNLILSS SLYLLLYISA PTIADFYSSP VLVDLSRILF
IIVIIDAIAL VPRSKLAIVL DFKTLGLVNS VSTIISALVA IIMVNSGLGY WSLVGLSLTK
SIITSLLLVI VTRWCPKLKF SRVSFSSLFS FSSNLLIAGT VARIVQNLYA VMIGRYFNAT
QAGYFQQAFS YTEMLSSAVT SVTQGVSYPL MTSIKDDRDR LIGIYKKVMG VITFVAFPVF
IGFAAVAEEF VLILLGEKWK EVIPILMVMS LSRLFTPISS LNLGILNASG RSDLFLKTDL
SKVPMVVGAL FIAIPYGIFW VACAHLTTTF ISFFINAYYP GKMFGFGALK QIKQMLPIAG
ISVVMFFSIY FIKFDNLLFQ FIIKIIVGIF IFVLFCLIFK PAAFIDIRSL LGGGNKSGRG
LV
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