Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1393 |
Symbol | |
ID | 5664706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1690742 |
End bp | 1692247 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641235956 |
Product | amino acid/peptide transporter |
Protein accession | YP_001501254 |
Protein GI | 157961220 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.825614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCAG CAAAACCCAA GGGGACGATG CTCGGGCATC CAACGGGACT ATTCCTGTTG TTTACAACAG AGTTATGGGA ACGTTTTAGT TATTACGCAA TGCGCGCGAT CTTGGTGCTT TATCTAGTAG ACCAAGTCAG TAATCAAGGT GGTGGTGGTC TTGGTTGGAC ACAGGCTGAT GCCCTTTCGC TATACGGAAC ATTTACCGCG CTAGTTTACC TTACGCCACT TTTCGGCGGT TGGTTAGCCG ATAATATTTT GGGCCAACGT AAATCGATTT ATATCGGTGG CGCATTGATG GCTGCTGGTC AGTTCTTGTT AGCTGCTCCA CATGAGTGGG TTCCAGGCTC TGCAACCATG GTATTCTACA TTGGTTTAGG TACCCTGATC ATTGGTAATG GTCTTTTCAA GCCAAACATC TCAACCATGG TAGGTGACTT ATATGAAGAA GGTGATCACC GTCGTGACGG CGCATTCACT ATCTTCTACA TGGGTATTAA CTTAGGCGCG GCATTATCTG GTTTTGTAGT AGCCTGGGCT TATACTAACT TTGGTCATAG CGCTATCGTT GACGGTAAAG AAGTTTTCAT CAATAACTGG CAGGCAGGTT TCTTCTGTGC TGGTATTGGT ATGATTCTTT CGCTAATCAT TCAATTTGTA TTTGCTCAAA AATTACTTGG CGATATCGGT ACCGTTCCTG CTGCAAAACT AGAAAAGCAG AAAGCTGCTG AATCTGGTCA AGTGCGTAAA GAACCTTTAA CTAAGATTGA ACGCGATCGC ATTAAAGTGA TTATGGTTAT GGGTCTGTTT ACCATCATAT TCTGGGCAGG TTTTGAACAG GCCGGCGGCC TGATGAACCT ATTCACTAAC GACTTTACTG ATCGTATGAT TGGCGGCTGG GAAGTCCCAA CCACTTACTT CCAATCTTTA AACGCTATCT TTATTGTTTT ATTTGCTCCT GTGATTGCCT CTATCTGGAT CCGTTTAGGC AAAAATGAAC CAAACTCTCC AGTGAAATTT GCACTAGGTC TAGTACTACT AGGTATTGGT TTCCTATTCA TGATCGGTGC CGTTTTACAA ATGGACGGTG ACGCTAGTGC TAAATCAAGC ATGTGGTGGT TAGTGGGTGC ATACTTCTTC CATACAATGG GTGAATTATG TCTATCACCT ATTGGTCTAT CTATGGTGAC CAAGCTTGCT CCACTGCGTA TTGCATCGTT AATGATGGGC GCATGGTTCC TATTCATCGC CGCAGCTAAC TTTGTTGCCG GTGTTGTGGG CTCTATGATT GGTCACAGTG GCGCTAAAGA AGAGCAACTT GCTAATGCAA TGTCTATCTT CGCAGGTATC GCGATTGTAG CTGCAATTTC TGGTGTTGTT CTTTACTTCC TTGCTGACAA GCTTGTTGAC TGGATGCATG GCGCTGAAGG TGGCCCGCAT ACTGAAGAAG AAGCTTTGAC AGAAGAAATC GCTATTACTG CAGAGCATGA AGCTATTAGA AGATAG
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Protein sequence | MNAAKPKGTM LGHPTGLFLL FTTELWERFS YYAMRAILVL YLVDQVSNQG GGGLGWTQAD ALSLYGTFTA LVYLTPLFGG WLADNILGQR KSIYIGGALM AAGQFLLAAP HEWVPGSATM VFYIGLGTLI IGNGLFKPNI STMVGDLYEE GDHRRDGAFT IFYMGINLGA ALSGFVVAWA YTNFGHSAIV DGKEVFINNW QAGFFCAGIG MILSLIIQFV FAQKLLGDIG TVPAAKLEKQ KAAESGQVRK EPLTKIERDR IKVIMVMGLF TIIFWAGFEQ AGGLMNLFTN DFTDRMIGGW EVPTTYFQSL NAIFIVLFAP VIASIWIRLG KNEPNSPVKF ALGLVLLGIG FLFMIGAVLQ MDGDASAKSS MWWLVGAYFF HTMGELCLSP IGLSMVTKLA PLRIASLMMG AWFLFIAAAN FVAGVVGSMI GHSGAKEEQL ANAMSIFAGI AIVAAISGVV LYFLADKLVD WMHGAEGGPH TEEEALTEEI AITAEHEAIR R
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