| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1378 |
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| Symbol | fliA |
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| ID | 5661777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1675741 |
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| End bp | 1676460 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235942 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_001501240 |
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| Protein GI | 157961206 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.689794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATAAAG CGGCTGCGTA TACTCGTTTT GATAATAAGA CGTCTATCGT TGAACAGTAT
GCACCGCTTG TAAAAAGAAT AGCCCATCAT CTTTTGGCTC GTTTACCTGC ATCAGTCCAG
TTAGATGACT TGTTGCAGGC CGGCATGATG GGGCTACTCG AAGCGTCATC AAACTTTGAT
GGTAGTAAGG GCGCCAAATT CGAAACCTTT GCCGGTATTC GAATTCGGGG CTCTATGTTA
GATGAAATCA GGCGAGGCGA CTGGGTACCC CGTTCGGTAC ACCGTAATCA GCGCCGCGTG
GCCCAAGTTA TAGATGAACT TGAGCAGGAG TTAGGCCGTG ATGCTCGTGA TGGCGAAATC
GCCGAGCGAC TCGAGGTTTC ACTCGAAGAG TATCATGCAA TTTTAAACGA TGTTTCAGTC
GGAAAAGTTG TTGGTATAGA AGATTTAGGC GTAGCCGCAG ATGGGATAAA CCCAGAAGAT
GGCCACGAAG ACGATGCTTA TGAATCACTC GCTGAAGTTG AGTTTCATTC AGCGCTCGTC
GCAGCGATTA AATTATTACC AGAAAGAGAT GCGCTGGTTT TGTCGCTTTA TTACGATGAA
GCATTAAATT TAAAAGAGAT TGGGGCCATT CTTGAGGTCA GTGAGTCTAG AGTCAGCCAG
ATCCATAGTC AGGCGATGCT CAGGCTCAAG GGTAAACTCA AGCATTGGAC GCAAGAATAA
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| Protein sequence | MNKAAAYTRF DNKTSIVEQY APLVKRIAHH LLARLPASVQ LDDLLQAGMM GLLEASSNFD
GSKGAKFETF AGIRIRGSML DEIRRGDWVP RSVHRNQRRV AQVIDELEQE LGRDARDGEI
AERLEVSLEE YHAILNDVSV GKVVGIEDLG VAADGINPED GHEDDAYESL AEVEFHSALV
AAIKLLPERD ALVLSLYYDE ALNLKEIGAI LEVSESRVSQ IHSQAMLRLK GKLKHWTQE
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