Gene Spea_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1374 
SymbolflhB 
ID5661773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1669939 
End bp1671072 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content48% 
IMG OID641235938 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_001501236 
Protein GI157961202 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAA ACGATAGTAG TCAAGAAAAA ACAGAGGAAG CCACCTCCAG GAAGTTGCAA 
CAGGCCAAAG ACAAAGGGCA GGTTGCACGT TCCAAAGATC TGGGCACTTC TGCTGTGCTC
ATTGCTGCCT CGGTGGGGCT GTTAATGACC GGCCCTAACA TTGCTCAGGC TATGTTTAAC
ATCATGAACA AAATGTATAC CTTAAGTCGT GATGAGATCT TCGATACTAA CCAGATGATG
AATGTTTGGG GTGTGGTGGG CAGTGAGTTA GCCTTTCCTC TACTGGGTTT TATTGTGTTC
CTTGCCCTCA TCGCCTTTGC GGGCAACATC GCACTAGGGG GGATCTCCTT CTCCGTGAGT
GCTTTTATGC CAAAGGCCAG CAAAATGAGT CCAGTAGCTG GTTTTAAGCG GATGTTCGGT
GTGCAGGCGG TGGTTGAGTT AGCCAAAGGC ATCGCCAAAT TTTCGGTCGT GGCGATTACC
GCCTACCTTT TATTGAGCAT TTATCTCAAC GACATCTTGT TACTGTCTCA AGAGCATCTG
CCGGGCAATA TTTATCATGC TCTGGACTTA ATCGTGTGGA TTTTTATATT GCTCTGCGCG
TCGACCTTGC TGATTGTGAT GATAGATGTA CCGTTTCAGA TCTGGAACCA TGCTAAGCAG
TTAAAGATGA CCAAACAGGA AATCAAAGAC GAATACAAGG ATACCGAGGG TAAGCCTGAG
GTAAAGGGAC GTATTCGCCA GTTACAACGT GAAATGGCCC AGAGGCGTAT GATGGGTGAA
GTGCCTAATG CCGATGTGAT TGTGGTTAAC CCAGAGCACT ATGCCGTAGC GGTCAAATAT
GACGCAGGTC GCTCAACGGC GCCTTTCGTC GTTGCGAAAG GGGTCGATGA AGTTGCCTTT
AAAATTCGCG AGATCGCTCG TGAACATGAC GTGGCAATTG TGTCGGCACC GCCGCTTGCT
CGCGCGATTT ACCACACCAC CAAAATAGAT CAAGAGATCC CTGAGGGGCT GTTTACCGCA
GTTGCTCAGG TGCTTGCCTA TGTATTTCAA TTACGCCAAT ACCAAAAAGG CAAAGGCCGC
AAACCTAATG CTATCCCTAC CAAGCAACCC ATCCCAGACG ATCTACAGCA TTAA
 
Protein sequence
MAENDSSQEK TEEATSRKLQ QAKDKGQVAR SKDLGTSAVL IAASVGLLMT GPNIAQAMFN 
IMNKMYTLSR DEIFDTNQMM NVWGVVGSEL AFPLLGFIVF LALIAFAGNI ALGGISFSVS
AFMPKASKMS PVAGFKRMFG VQAVVELAKG IAKFSVVAIT AYLLLSIYLN DILLLSQEHL
PGNIYHALDL IVWIFILLCA STLLIVMIDV PFQIWNHAKQ LKMTKQEIKD EYKDTEGKPE
VKGRIRQLQR EMAQRRMMGE VPNADVIVVN PEHYAVAVKY DAGRSTAPFV VAKGVDEVAF
KIREIAREHD VAIVSAPPLA RAIYHTTKID QEIPEGLFTA VAQVLAYVFQ LRQYQKGKGR
KPNAIPTKQP IPDDLQH