| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1369 |
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| Symbol | fliN |
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| ID | 5661768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1667139 |
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| End bp | 1667519 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641235933 |
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| Product | flagellar motor switch protein |
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| Protein accession | YP_001501231 |
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| Protein GI | 157961197 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTACAG ATAGCGGTGA TGATTGGGCT GCAGCGATGG CTGAGCAAGC AATAGAAGAG
GCCAAAGCGG TTGAATTAGA TGAGTTTAAC AGCGACGGAG CACCTTTGAG TGAAGAGGAA
GCATCAAAGT TAGATGCGAT TATGGATATT CCGGTCACTA TTTCTATGGA AGTGGGTCGT
AGCTTTATCA ATATTCGTAA CCTACTGCAG TTAAACCAAG GATCAGTGGT GGAGCTTGAC
CGCGTAGCGG GTGAGCCGTT AGATGTTATG GTTAACGGTA CCTTGATCGC CCATGGTGAG
GTGGTTGTGG TGAATGACAA ATTTGGTATT CGTCTAACGG ATGTGATCAG CCAAACTGAG
CGCATCAAAA AGCTCAAGTA A
|
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| Protein sequence | MSTDSGDDWA AAMAEQAIEE AKAVELDEFN SDGAPLSEEE ASKLDAIMDI PVTISMEVGR
SFINIRNLLQ LNQGSVVELD RVAGEPLDVM VNGTLIAHGE VVVVNDKFGI RLTDVISQTE
RIKKLK
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