Gene Spea_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1360 
Symbol 
ID5661759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1657813 
End bp1658145 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content43% 
IMG OID641235924 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_001501222 
Protein GI157961188 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATTG GTGCGAATTC ATTACTGCAA GAGATGCAGT CACTCAATGG TCAAATCGGC 
ACTTCAAGCA TTCAAACAGG GATCACCCGT CAGGTACAAA ACACCTCGGG TAGTGATTTC
AGTCAGTTGC TATCCCAAGC TGTTGGAAAT GTAAGCGAAC TTCAATCAAA TGCTGCTAAT
CTCGCCACTC GACTCGATAT GGGAGATACC ACGGTGACGT TATCTGATAC CGTGATTGCC
AGAGAAAAAT CCAGTGTTGC TTTTGAGGCA ACCGTACAAG TACGCAATAA GCTTGTAGAA
GCTTATAAAG AAATTATGAG TATGCCTGTT TAG
 
Protein sequence
MQIGANSLLQ EMQSLNGQIG TSSIQTGITR QVQNTSGSDF SQLLSQAVGN VSELQSNAAN 
LATRLDMGDT TVTLSDTVIA REKSSVAFEA TVQVRNKLVE AYKEIMSMPV