Gene Spea_1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1356 
SymbolfliS 
ID5661755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1652133 
End bp1652534 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content42% 
IMG OID641235920 
Productflagellar protein FliS 
Protein accessionYP_001501218 
Protein GI157961184 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID[TIGR00208] flagellar biosynthetic protein FliS 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.260151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGGTT CGCTTCAATC ATATCGTAAG GTCTCATTAG ATAGCAGTAT TGCTGTGGCT 
TCACCGCATA AGGTCATTCA GATGATGTTT GCCGGAGCTT TAGAGCGCTT AGCTCAGGGC
CGTTATGCCA TAGAGCAGAA TAACCTAGAA CTAAAGGGTG TGAGTTTAGG TAAAGCTGTG
AGTATTGTTG CTGGATTAAA TAGTAGCTTG AATATGGAAG CTGAGGGTGA TGTTGCTGGC
AACCTAAGCG CTCTTTATGA TTTTATGCTG CAGAGGATCA CCGATGCAAA CATCAACAAT
GATACTAAAG CGATAGATGA TGCAACCGAT ATTCTACGTG TTATTAAAGA GGCGTGGGAT
GCAATACCTA GCGAATTGCA TGAGCTATCT TCACAAAACT AA
 
Protein sequence
MRGSLQSYRK VSLDSSIAVA SPHKVIQMMF AGALERLAQG RYAIEQNNLE LKGVSLGKAV 
SIVAGLNSSL NMEAEGDVAG NLSALYDFML QRITDANINN DTKAIDDATD ILRVIKEAWD
AIPSELHELS SQN