Gene Spea_1351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1351 
Symbol 
ID5661750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1646348 
End bp1647532 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content47% 
IMG OID641235915 
Productflagellin domain-containing protein 
Protein accessionYP_001501213 
Protein GI157961179 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTA GCGTTAATAC TAACGTCACA TCGATGAGAG CACAGAACAA CCTAAACAGT 
GCTAACTCAA GCACGCAAAC ATCGATGGAA CGTTTATCAT CGGGTCTGCG AATTAATAGC
GCCAAAGATG ATGCTGCAGG GCTGCAGATC TCTAACCGTA TGACCAGCCA AATTAACGGC
ATCGGCGTTG CAATGCGTAA CGCTAACGAC GGAATCTCTA TTGCACAGAC AGCTGAAGGT
GCGATGCAAG AGTCGACTAA CATCTTACAG CGTATGCGTG ACCTGTCTTT ACAATCGGCT
AACGGTTCTA ACTCCGCGGA TGATCGCGCT GCGATGCAAA AAGAGATGAC CTCACTGCAG
GCGGAATTGA CTCGTATCTC TGATACCACC TCTTTCGGTG GCCAGAAGTT ACTCAATGGT
GATTATGGTA CGCAGAACTT CCAGGTGGGA GCTAACGCCA ATGAGACTAT TTCATTAACA
CTATCAGATA TTTCAGCCGA TCAACTTGGT TCATCTGGTC AATCGGTAGA TGGTGCGCTA
ACTGCAGCGG AAATTACTGC AACTGTTGCA GGTGGTACGG GAAGTGGTGA GATTTCATTC
TCTTATACGC CTTTGGATGG CTCCGCTGAA ACACTAACCG CCGATCTAAC GGGTGTGACT
GATGCGGATG GCATGGCTGC AGCAATTAAT ACAGCCCTAG CAGGAGCAAG TATTAGTACA
GGTGTCATAG CATCTTCTGA TGGTACAGAT GTGACTTTTG GTGGCATAGG TAACAATGGC
GATGTGCTAA CGTTAACAAG AAAAATCGAC GATGGTACGA CTACGGCTCC GGCAACAGCT
TTTGCGTTAG GCGGAGATGA TTCACAAGTT ATTTCGGTTG ATGATATCGA CTTAACCACT
GAAGCTGGCG CTCAAAGTGC AATATCAACG ATTGATGCGG CGATCATACA AATTGATAGT
CAACGTGCCG ACTTAGGTGC GGTGCAAAAC CGTATGAGCT TTACCATCAA CAACTTGAGC
AATATTCAAT CAAATGTTAC TGATGCCCGA AGCCGAATTC AAGATGTGGA CTTCGCAAAA
GAAACTGCCG AGCTGACTAA ACAGCAAATT CTGTCACAAA CCTCTTCTGC CATGCTTGCA
CAGGCGAACC AGTTACCGCA AACAGCCTTA TCACTGCTTG GTTAA
 
Protein sequence
MAISVNTNVT SMRAQNNLNS ANSSTQTSME RLSSGLRINS AKDDAAGLQI SNRMTSQING 
IGVAMRNAND GISIAQTAEG AMQESTNILQ RMRDLSLQSA NGSNSADDRA AMQKEMTSLQ
AELTRISDTT SFGGQKLLNG DYGTQNFQVG ANANETISLT LSDISADQLG SSGQSVDGAL
TAAEITATVA GGTGSGEISF SYTPLDGSAE TLTADLTGVT DADGMAAAIN TALAGASIST
GVIASSDGTD VTFGGIGNNG DVLTLTRKID DGTTTAPATA FALGGDDSQV ISVDDIDLTT
EAGAQSAIST IDAAIIQIDS QRADLGAVQN RMSFTINNLS NIQSNVTDAR SRIQDVDFAK
ETAELTKQQI LSQTSSAMLA QANQLPQTAL SLLG