| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1343 |
|---|
| Symbol | flgE |
|---|
| ID | 5661742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 1636277 |
|---|
| End bp | 1637638 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641235907 |
|---|
| Product | flagellar hook protein FlgE |
|---|
| Protein accession | YP_001501205 |
|---|
| Protein GI | 157961171 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1749] Flagellar hook protein FlgE |
|---|
| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTTA ACATTGCATT GAGCGGTATA TCGTCTGCAC AAAAAGACCT AAATACAACG
GCAAACAACA TCGCTAACGT TAACACCACA GGCTTTAAAG AATCTCGTGC TGAATTTGCT
GATGTTTATG CGAGTTCTAT ATTTGCCAAT AGTAAAACCA CTGTGGGCGG CGGCGTGGCA
ACCAGTCAAG TCGCTCAGCA GTTTCATCAA GGCAGCATGC AGTTTACCAA TAACTCGCTC
GACATGGCGA TTAATGGTGG TGGCTTCTTC GTGACTTCAT CTGAAGTAGG TTCGCAAGAT
CACTCATTTA CTCGTGCAGG TGCATTTAAG TTTGACTCAA ACAACTATAT CGTTGATTCT
GCAGGTAACT TCTTACAGAC CTTCCCGGTA GATAAAGATG GAAATTCTAC ATCTGTAAGT
TTAACTACCA CTAAGCCTGT ACAAATTCCA GATACCGCAG GTAGCCCGGT TAAGACAGAT
CAAGTCGGTA TTCAGATGAA CCTCAACGCG GGTGAGTCTA CATTGGATCC TGCTGCTTTC
GATCCCGATG ATCCTGAGAC CTTTAACAAC TCAACATCGG TGACCATATA CGACTCTCTC
GGCGAGCCAC ATATTCTTAC CTCTTACTTC GTACGACCAC CTAATGCAGC CCATATAGGT
GAGAGTAACT GGGTAGCGTT TTATGCCGTG GACGGTAAGC CTGTTGATTT GGACCCAGCT
GCTGGTGAGT ATGATATCGA TACCGATGGC GATGGCGCAG TTGATGGACA AGCAAGTGCT
GAGAACGCGG CGGGTTGGAA AGGCGCTGCA GTTTCTTTCA ATGACACTGG GGCGTATACA
GGTAGTAATC CAGCCGTTAT CACTACTGAA GCCCTTGGTG TTGGCGGCGC TAACGTATTA
GGCCCAGGTG CAGACGGTAG CCAGACGCTA ACGCTTGATT TCAATAATCC AACTCAGTAT
GCATCGCCAT TTGAGGTCAC GGAGTTGAAT CAAAATGGTA CAACAGTTGG CCGTTTGACC
AACGTTGAAG TCGGCGCAGA TGGTCTGATT AACGCAAGCT ACAGTAACGG CTCTACGGTA
CCTCTAGCAC GCGTTGCTTT GGTAAGCTTT GCTAACGAGC AGGGGTTGTC TCAGGCGGGT
AACACCTCTT GGAAAGCCAG CTTAGATTCG GGCCCAGCAC TAGCGGGTGA AGCGAACAGT
GGTACCTTTG GTAGCATTCG CTCATCGGCG CTTGAGCAGT CAAACGTTGA TTTGACTACC
GAGTTAGTCG ACTTGATCTC GGCGCAGCGT AACTTCCAGG CGAACTCAAG AACCCTAGAA
GTGAATAACA CGCTACAACA GACAGTGTTG CAAATTCGAT AA
|
|---|
| Protein sequence | MSFNIALSGI SSAQKDLNTT ANNIANVNTT GFKESRAEFA DVYASSIFAN SKTTVGGGVA
TSQVAQQFHQ GSMQFTNNSL DMAINGGGFF VTSSEVGSQD HSFTRAGAFK FDSNNYIVDS
AGNFLQTFPV DKDGNSTSVS LTTTKPVQIP DTAGSPVKTD QVGIQMNLNA GESTLDPAAF
DPDDPETFNN STSVTIYDSL GEPHILTSYF VRPPNAAHIG ESNWVAFYAV DGKPVDLDPA
AGEYDIDTDG DGAVDGQASA ENAAGWKGAA VSFNDTGAYT GSNPAVITTE ALGVGGANVL
GPGADGSQTL TLDFNNPTQY ASPFEVTELN QNGTTVGRLT NVEVGADGLI NASYSNGSTV
PLARVALVSF ANEQGLSQAG NTSWKASLDS GPALAGEANS GTFGSIRSSA LEQSNVDLTT
ELVDLISAQR NFQANSRTLE VNNTLQQTVL QIR
|
|---|
| |