| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1234 |
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| Symbol | fadE |
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| ID | 5661633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1502313 |
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| End bp | 1504550 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641235796 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_001501096 |
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| Protein GI | 157961062 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATAA GAACACAACT AAAAAAAATA TTGCCAAGCA TTTCTACCAC AGAACAAGAG
GCACTCGATG CCGGTGATGT GTGGTTAGAA GGTTCGATTT ATCAAGGTGT ACCTGACTTT
GCAGCCCTAC GTGATATCCC CGTTGCTACT CTGTCTAGCG ACGAGCAGGC ATTCCTAGAC
GGTCCAGTGG CGACCTTACT AGAGATGGTG GATGACTTTG AGATCCAGCG CAGCACACAC
CTCCCTGAAA ATATTCTTAA CTTCCTAAAA GAAAATAAAT TTTTCTCGCT TATTATTCCC
AAATCATTCG GTGGCCTCGA GTTTAGTCCC TACGCAAACT CGACTATCGT TGCCACTATT
GCCGCTAAAA GTTCGGCGGT TGCGGTCACT GTAATGGTGC CAAACTCACT CGGTCCCGGT
GAGTTGTTAA TGCACTACGG CACCTCTGAG CAACAAGATT ACTGGTTACC TCGCCTCGCT
AACGGCCAAG AAATTCCTTG TTTTGCACTA ACTAGCCCTG AGGCAGGTTC AGACGCTGGC
GGTATTCCGG ATATCGGTAC AGTCACAATG GGCGAATACC AAGGTGAAAA AGTACTTGGC
TTAAGCGTAA CTTGGGATAA GCGTTATATC ACCCTTGCCC CCATCGCCAG TGTATTAGGC
TTGGCCTTTA AGGTAGAAGA TCCAAAGGGT CTACTTGGTG GCAAAGAAAA TCTTGGTATC
ACCTGCGCGC TTATTCCTAG GTCGCACCCA GGTGTGCAGC TAGGTAATCG TCATGACCCT
ATGGGGGTTC GCTTTTACAA CGGTACTACC CGTGGTGAAA ACGTGTTTAT TCCAATGGAC
TTCATCATAG GTGGCCAGAA AAACATCGGC CGCGGCTGGG CAATGCTCGT TGCCTGTCTC
GGTGCTGGAC GCGGCATTTC ACTGCCAGCA CTCGGTGTAT CAGTGAGTCA GGCGTCATTT
AAATCTTCAG CTGAATATGC AGCAGTGCGT GAGCAGTTTG GCCTATCGAT TGGTAAGTTT
GAGGGTATTC AAGAGAAGCT TGCCGATATC GCCGGTAAAA CCTATCTGCA AGAAGCGATG
CGCGTGCTAA CAACTGAAGG CCTAGGCCTT GGGTTAAAGC CATCGGTTGT GACAGCCATC
GCTAAGTATC ATATGACAGA GCTTGGCCGT GATATCCTCG ACTCGGCAAT GGATATTCAG
GCAGGTAAAG CGATTCAGTG TGGCCCGCAA AACACCTTAG CCTCTGGCTA TGTGGCCCAA
CCGATTGCGA TTACCGTAGA AGGCGCCAAC ATTCTCACCC GTAACCTGAT GATTTTCGGT
CAAGGTGTGA TGCGTTGTCA CCCATACTTG CAGTCTATGG TGGAATCTAT CCACTCAAAC
GAGAAAAGTG CTGACAAAGT CTTTAACGGT ATTTTACGTA AAACAGTTAG CTACAGTGTT
GGCAACAGCT TACGTGCCTT TAAGCTAGGT TTATTACCTT TTACCGCATC AGCAGCCTCA
ACTCTTGCTG AAGTGAAGCC CTATGAGCAA TCAGTACATA AGCTAGCCTC TAAGCTAGCG
GTATATGCAG ACTTCTCGTT ATTAGTTTTA GGTGGCAAGC TCAAGCAAGC AGAAATGCTG
TCAGCCCGCC TAGGTGATGT GATGAGCTAC TTGTACGCCG CCATGGCCTC GATTCGTTAC
TATGAAAAGA AATTAACTGC TGCAGAGCAA AAAGAAGCGG CGCCCTATTT CCATTACGCT
ACGCGCTGGT CACTGTGTCA GGCAGAGAAA GCCTTGTTGG ATTTCTTAGA TAACTTCCCT
TCATCGGCAA CGCGTAAGTT TATGCGTTTA GTCACTGTGA CTTACTCGGC TAAGATGCCA
AAAATCAATG ATAATTTAGT TCGTGAATTA GCAGAGCAGG CTCAGCTTAA TACCGAGTTC
AAGAAGAACC TGACTCATCT TATTAAGCCT GTGGCAGGTG ACGGTAACGA CATTAACGAG
CAAGCTTACC TTGCGAAGAT GGTCTGCTTA CCACTACTTG CCAAGGTCAA AAAGGCGATT
CGCGCCAAGA CGTTTAAGCC AGGAGTCAGA TTCGCACTGA CCTTAGATGC CGCGCTTGAG
GCTAAGGTGA TCACCAGCGA CGAGCACAAG CTTTTGCAAG ATTACAACCT TAAGCGTGAG
CGTGCTATTC GAGTCGATGA GTTTGACTTT GATATGAACC TTATCGATAA CAAGCCCGAG
TTGAAGATCG CTAACTAA
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| Protein sequence | MSIRTQLKKI LPSISTTEQE ALDAGDVWLE GSIYQGVPDF AALRDIPVAT LSSDEQAFLD
GPVATLLEMV DDFEIQRSTH LPENILNFLK ENKFFSLIIP KSFGGLEFSP YANSTIVATI
AAKSSAVAVT VMVPNSLGPG ELLMHYGTSE QQDYWLPRLA NGQEIPCFAL TSPEAGSDAG
GIPDIGTVTM GEYQGEKVLG LSVTWDKRYI TLAPIASVLG LAFKVEDPKG LLGGKENLGI
TCALIPRSHP GVQLGNRHDP MGVRFYNGTT RGENVFIPMD FIIGGQKNIG RGWAMLVACL
GAGRGISLPA LGVSVSQASF KSSAEYAAVR EQFGLSIGKF EGIQEKLADI AGKTYLQEAM
RVLTTEGLGL GLKPSVVTAI AKYHMTELGR DILDSAMDIQ AGKAIQCGPQ NTLASGYVAQ
PIAITVEGAN ILTRNLMIFG QGVMRCHPYL QSMVESIHSN EKSADKVFNG ILRKTVSYSV
GNSLRAFKLG LLPFTASAAS TLAEVKPYEQ SVHKLASKLA VYADFSLLVL GGKLKQAEML
SARLGDVMSY LYAAMASIRY YEKKLTAAEQ KEAAPYFHYA TRWSLCQAEK ALLDFLDNFP
SSATRKFMRL VTVTYSAKMP KINDNLVREL AEQAQLNTEF KKNLTHLIKP VAGDGNDINE
QAYLAKMVCL PLLAKVKKAI RAKTFKPGVR FALTLDAALE AKVITSDEHK LLQDYNLKRE
RAIRVDEFDF DMNLIDNKPE LKIAN
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