Gene Spea_1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1226 
Symbol 
ID5661625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp1491385 
End bp1492005 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content47% 
IMG OID641235788 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_001501088 
Protein GI157961054 
COG category[R] General function prediction only 
COG ID[COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.46462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTCG CGGCAAAAAA AATCCTCGTA TTGTATGCAC ATCCCTCCCA AGAACGATCT 
GAAATCAACA CTCCCCTGTT TAAAGCGACC CAATTACAGC CGAACGTGAC TGCCATTGAT 
CTCTATGGTG AATACCCCAC TTTCAGGATC AATATCGATA AAGAACAACA AAGACTCAGA 
GACCACGACA TAGTGGTCTT TATGTTTCCG CTGTACTGGT ACTCCACTCC AGCCATTTTA 
AAAGAGTGGC AAGATCTGGT CTTAGAGTAC AACTTTGCCT ACGGTACTAA AGGTAAAACC 
CTATGTGGCA AAACCTTTTT GTGTGCACTT AGCGCAGGGG GCAGTGAAGC CGCCTACAAT 
GAAGATGGCT ACAATCACTT TACCCTAAGA GAGCTACTTC GCCCCCTTGA GCAGATGGCC 
AACTTAACCG GTATGAAGTT CTTAGCGCCT TTTGCCCTGT TCTGCGCTCG CAGCGCCTCA 
GAGGAAAACC GAGTCGATAC CCATGTGCAA AAGTGGGTTC GAACACTCAA GGCACTTAGT 
GAGGACAGAT TCGATATCGA ACAGGCTCAA TCCCTTGAAA AACTCAATGG TCACCTCGAC 
CAATTGATCC GGGAGCACTA A
 
Protein sequence
MALAAKKILV LYAHPSQERS EINTPLFKAT QLQPNVTAID LYGEYPTFRI NIDKEQQRLR 
DHDIVVFMFP LYWYSTPAIL KEWQDLVLEY NFAYGTKGKT LCGKTFLCAL SAGGSEAAYN 
EDGYNHFTLR ELLRPLEQMA NLTGMKFLAP FALFCARSAS EENRVDTHVQ KWVRTLKALS 
EDRFDIEQAQ SLEKLNGHLD QLIREH