Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1225 |
Symbol | |
ID | 5661624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1489454 |
End bp | 1491382 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641235787 |
Product | potassium efflux system protein |
Protein accession | YP_001501087 |
Protein GI | 157961053 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.403013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCTT ATTTTATTCA AGCTTTTATC TATTTATGCG CCGCCGTCAT CGCCGTGCCT ATTGCTAAGC GGCTCGGCCT AGGCTCAGTG CTGGGCTATT TAATGGCAGG GGTAGTAATA GGGCCTATTA TTGGTCTGGT CGGTGCCGAA ACCAACACAC TGCAGCACTT TGCCGAATTT GGCGTGGTGA TGATGCTATT CCTAGTAGGT CTCGAACTTG AGCCCAAGAT GCTCTGGAAT ATGCGCAATA AACTTATTGG TTTAGGTGGA CTTCAAGTAG GACTCTCTAC CTTAGTGGTG ATGGGTATCG CCCTGAGTTT CGGCTATGGC TGGAGTATCG CCCTCACGGT GGGAATGATT TTCTCGCTGT CATCGACCGC TATCGTACTG CAGACCTTCA ATGAGAAGAG TCTAACCAAA ACCGAAGGCG GAAAGAATGC CTTTTCGGTG CTGTTATTTC AAGATATCGC CGTGATCCCT ATGCTGGCGT TTATCCCGCT CTTGGCCTTG CCTGAACTCG TCGAAAAAGC TCAGTCTGTC ACCCAAAGTG CTGCAGAGCA CCATGAGGAG CTTTCGCTCG TCGCAGGTCT GCCGGGCTGG GCTTACGGAG TGGTCGTCTT GATGGCCATC GCTAGCGTCG TGATTGGCGG TCATTATTTG AGTCGTCCGC TATTTCGCTA TGTCGCCAGC TCAGGACTTA GGGAGATCTT TACTGCCACC GCGCTTATGC TGGTTATTGG TATTGCTGCA CTCATGAGCC TCGTAGGGCT ATCTCCCGCA CTAGGCACCT TCCTTGCGGG CGTTGTATTG GCAAACAGTG AGTTTAGACA CGAGCTTGAG TCCAATATCG AGCCTTTCAA GGGGCTATTA CTCGGGTTAT TTTTTATTAC CGTGGGCGCA GGCATCAACT TCGATGTGCT GCTCAGTAAT ATCGGCCCAG TGATGGCAAT GACCCTTGGG GTCATTCTGA TTAAGGCCGC TGTATTACTG GTACTGGCCT TTATTTTTAA GATCAGGGGC AGTGACCGTT GGCTATTTGC CTTGAGCCTA GCGCAAGCGG GTGAGTTTGG TTTCGTGCTA CTGAGTTACA CAGTGCAAAA CCATGTGATC CCTACCGAGC TTGCTCAGTT ACTGTCACTA GTGGTTGCCA TATCCATGTT CCTCACACCA GGCCTATTCA TTCTGTTTGA TAAAGTCATT TTACCCCGCT ATGAAAAAAC AGAAAATACA CGAGAGCCTG ATGATATCGA CGAGACAGGC ACTGTGATTA TTGCCGGAGT CGGCCGCTTT GGGCAGATAG TTAATCGCCT GCTGGTGACC AATGGTGTTA AAACAGTCGT ACTGGATCAT GAAGTTCAGC AAATCGAAAA CTTAAGGAAA ATCAATACAA AAAGCTATTA CGGCGATGCC ACTCAGCCCG ACTTACTCCA TACTGCAGGT ATCGAGCAGG CTAAGATGCT TGTCATTGCC ATAGATGATC CTGAACGAGC CGTAGGTTTA GTCGAATATA TCAAGCATAC CCATCCCCAT GTGATCGTGA TGGCTCGCGC CTTTGATCGA AGGCACCTGT ATCGTCTTCG TAATGCGGGG GCTGACTTTA TGGTAAGCGA GACCTTCCAT TCGGCGCTCA ATTTAGGTAA GCATGCACTG ATAAAACTTG GCGTACACCC GTTTAAGGCC GAGCAACAGC GTGCAACTTT CTATGAGACC GAAACGACTC ATAAAGACAC TCTGTATGAG GCTTGGAAAC AGTTCACCGA AGACGATAAA TACCTAGTAC ATTATCGCGA TATGTTTATC CAGCTTGAAG AAACTCTAAG CGAAGCGATG AAAGACGAGC GTTATCGCAG CTTTTCAAAA GTGGAGCGCA GCTGGACGCC ACCTCCTAAG GAAAATCATA CTGAATTTTC TAAAGCTGAA AGCGATTAA
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Protein sequence | MTAYFIQAFI YLCAAVIAVP IAKRLGLGSV LGYLMAGVVI GPIIGLVGAE TNTLQHFAEF GVVMMLFLVG LELEPKMLWN MRNKLIGLGG LQVGLSTLVV MGIALSFGYG WSIALTVGMI FSLSSTAIVL QTFNEKSLTK TEGGKNAFSV LLFQDIAVIP MLAFIPLLAL PELVEKAQSV TQSAAEHHEE LSLVAGLPGW AYGVVVLMAI ASVVIGGHYL SRPLFRYVAS SGLREIFTAT ALMLVIGIAA LMSLVGLSPA LGTFLAGVVL ANSEFRHELE SNIEPFKGLL LGLFFITVGA GINFDVLLSN IGPVMAMTLG VILIKAAVLL VLAFIFKIRG SDRWLFALSL AQAGEFGFVL LSYTVQNHVI PTELAQLLSL VVAISMFLTP GLFILFDKVI LPRYEKTENT REPDDIDETG TVIIAGVGRF GQIVNRLLVT NGVKTVVLDH EVQQIENLRK INTKSYYGDA TQPDLLHTAG IEQAKMLVIA IDDPERAVGL VEYIKHTHPH VIVMARAFDR RHLYRLRNAG ADFMVSETFH SALNLGKHAL IKLGVHPFKA EQQRATFYET ETTHKDTLYE AWKQFTEDDK YLVHYRDMFI QLEETLSEAM KDERYRSFSK VERSWTPPPK ENHTEFSKAE SD
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