Gene Spea_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1215 
Symbol 
ID5661614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1477930 
End bp1481208 
Gene Length3279 bp 
Protein Length1092 aa 
Translation table11 
GC content49% 
IMG OID641235777 
Productpeptidase S41 
Protein accessionYP_001501077 
Protein GI157961043 
COG category[S] Function unknown 
COG ID[COG4946] Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.36755e-05 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCC GTCACTCTCT CGCATGCTGC ATGCTTGCCT TAGGCACCAT TAGTATTTCC 
CCCTCTTTTG CCGCTGAGTC CACTGTAAAG CCAGGTTACT TTCGTGCGCC AGCTTTGAAT
CAACAGACTT TAGTCTTTAC CGCAGAAGGC GATCTTTGGA CCCAATCTTT AGGGGACGCT
CAAGCGAAAC GCCTGACAAG CCTACCTGCA CAAGAATTGG GTGCGACAAT CTCCCCCAAT
GGCAAGTCAG TGGCTTATGT CGCCAACTAT GAAGGCTCGA CAGAAGTTTA CGTTATCCCT
ATCGCTGGTG GGCAAGCAAA GCGGGTGAGT TTTGAAAATA GCCGGGTTCG GGTTCAAGGC
TGGACCGCCG ATGGCAAGGT ACTTTACTCA ACCGACAATG CATTTGGTCC GGCGAACTAC
TGGGTGCTTA GAACCGTCGA ACCCGATACT TTGATAACGG TAGACTTACC GTTAGCCGAT
GCGATCGAAG GCGCGATAGA TGACAAGGGA GAATACCTTT ACTTCACTCG ATTTGGTCTA
CAGACCACTG GCGATAACGC CAAGGTTTAT CGCGGCGGCG CTAAAGGCGA GCTGTGGAAG
TTCAAGTTAG CCAGTAAGCA AGAAGCCACG CCACTGACTC AAACTCATCA AGGTTCTGTT
AGGCAGCCAA TGCTTTGGCA ATCAAGGCTG TATTTTATTA GCGATAGTGA CGGCAATGAC
AACATCTGGT CTATGGCGAC CGATGGTAGT GATGCTAAGC AGCATACCCA TTACACTGAC
TGGCAGGTTC GCGGCGCAAG ACTAAATCAA GGTCGTATCG TTTTTCAACA GGGAGCTGAC
ATCAAGCTAT TTGATATCGC CTCTGGCAAA GAGCAAACCC TTGATATTGA GCTTATCTCC
GATTTTGCAC AAAAGCGTGA GCATTGGGTT AAAGAGCCGA TGAAGTACGC GACTTCGACC
ACGTTAGCGC CCAAAGGCGA CAAGGTGGTG ATCACCGCAC GTAGCCATGT GGCAATTGCG
GGCACCGATG GTCAACGCTT AGTTGAAATT GCACTGCCTA AACACAGCCG AGTTCGCAGT
GCGGTAATGA GTCAAGATGG CGCTTGGGTT TACGGTATTA GTGATGCCTC TGGTGAGCAA
GAGGTATGGC AGTTTGCCGC CGATGGCAGT GAAGAGTCTA AGCAGCTGAC TAAAGACGCT
AAAACCTTAA GGCTTAACCT ACACCTATCC CCCGATGGTC GCTATCTTGC CCATGATGAC
TATGACGGCA ATGTTTGGAT GCTCGATCTT AAAAAGGGGA GTAACAAGAA GATCATCACC
CAAGGCGAAG GTCTAGGCCC TTATGCCGAT ATTGTCTGGT CGGCAGACAG CCGTTTTATT
GCTTTAACTA AAGCAGAGAT GGGCAAAGCG CGACCACAAA TCGTACTGTA TTCGCTAAAT
AAAAATCGTG CAGAGTCTTT GACCAGCGAT AAGTATGAGT CCTTTTCGCC AAGCTTTAGT
GCCGATGGTG ATTGGTTATA CTTCCTGTCT AATCGAAAGT TTGTTTCTAC CCCGAGCTCA
CCTTGGGGAG ACAGAAACTT AGGCCCTATG TTTGATAAGC GCACCCAAGT TTTTGCTATT
GCCCTCAATG ACGATGCGCG TTTTGCTTTT CAAAAGCCTA ATGAGCTGAT GTCTGAACCT
CAAAAAGCCG ATGACAATGA GGTAGAGACA GAGGTCGAGT GGGGCGGTCT ATCTAGTCGT
CTATGGCAGG TGCCTATTGC CGCAGGCAAT TATGACTCTC TACAGATGGC GAAAGATAAG
TTCTATCTAC TCGATACGTC GACCAGTGGT AAGTCGACGC TTAAAGTGGT GAAATTCGAT
GTGCTAAGCC CTAAGGTTGA GACTTTTTCC AAGGATGTTG GCGAGTATCA ACTATCTCAA
GATGGCGAAA AATTGTTTAT CCGTAAGCAG TCTAAGCAGG GTAGCGAAAT GCTGATTGTC
GATGCGGGTG ACAAGTTGCC TAAAGAACTT AACCACGCCA AAGTACAAAC CAATCTGTGG
CAACTCGCCA TCGAACCTGC AGCGGAGTGG CAGCAGATGT TTGAAGATGC CTGGTTGATG
CATAGAGACT CTTTCTATGA CAAAAATATG CGCGGTCTTG ACTGGCAAGC AACTAAGGCT
AAGTACCAAC CTTTGGTCGA TAGGCTCACG GACCGACATG AGTTAAATGA TCTCTTTATG
CAGATGATGG GCGAGCTAGA TTCACTTCAT TCGCAGGTGC GTGGTGGCGA TGCGCCTAAA
GATCCGAGCA AAGCTAAATC GGCAAGCCTA GGGGCGCGAC TCGAACAAAC CAAGGCTGGC
GTCGTTATTG AGCATATCTA TCAGGGCGAC CCAGAACTAC CTGCACAGGC GGCGCCATTA
ATGCAGATGG GCGTTAACGC AAAGGTGGGA GACCTGATCG TCGCTATTAA TGCTAAAAAG
CTCAGTAATA TTGCCGATGT GACTAAACTT TTGCGCAACC AAGCAGGCAA GCAGGTTTTG
CTCACCCTTA AACGCGGCAG TAAAACCCAC CAGACCATAG TTAAACCCGT CACGGCGTCT
AAAAATGCCA AGCTCAGATA TGTTGATTGG GTGCGTCACA ATAGTGATGA AGTCAGTGAA
AGTAGTGACG CTAAGATAGG TTATCTGCAC CTATACGCTA TGGGAAGCGG AGATATCGCC
AGCTTTGCGC GCGAGTTTTA TGCCAATGTC GACAAAGAGG GTTTGATTAT CGATGTGCGC
CGTAATCGCG GCGGTAATAT CGATAGCTGG ATCATCGAAA AGTTACTGCG CCGCACCTGG
GCATTTTGGG CACCAACTCA TGGTACCCCA TCGGGTAATA TGCAGCAGAC CTTTAGGGGC
CAGCTGGTGG TGTTGACCGA TCAGTTGACC TATTCAGATG GCGAAACTTT CTCGGCAGGG
GTAAAGGCGT TAGGGATTGC GCCCTTGATA GGTAAGCAAA CCGCGGGTGC AGGTGTCTGG
TTGTCTGGCC GTAACTCTTT GACTGACAAC GGCATGGCAC GGGTTGCTGA GTATCCGCAA
TATGCTATGG ATGGTAGTTG GATTATCGAA GGCCGTGGCG TCAGCCCAGA CATTGAAGTG
GATAACTTAC CCTATGCGAC ATTTACAGGC CACGATGCGC AGTTAGAAAA AGCGATCAGC
TACTTGAAGG GGGCGCTACA GGAGCAACCC GTTCACGAGT TAACGCCCAA GCCAATGCCT
ACAAAGGGCA TGGCTGAAGA CGTATATAAG GCGTTTTAA
 
Protein sequence
MKLRHSLACC MLALGTISIS PSFAAESTVK PGYFRAPALN QQTLVFTAEG DLWTQSLGDA 
QAKRLTSLPA QELGATISPN GKSVAYVANY EGSTEVYVIP IAGGQAKRVS FENSRVRVQG
WTADGKVLYS TDNAFGPANY WVLRTVEPDT LITVDLPLAD AIEGAIDDKG EYLYFTRFGL
QTTGDNAKVY RGGAKGELWK FKLASKQEAT PLTQTHQGSV RQPMLWQSRL YFISDSDGND
NIWSMATDGS DAKQHTHYTD WQVRGARLNQ GRIVFQQGAD IKLFDIASGK EQTLDIELIS
DFAQKREHWV KEPMKYATST TLAPKGDKVV ITARSHVAIA GTDGQRLVEI ALPKHSRVRS
AVMSQDGAWV YGISDASGEQ EVWQFAADGS EESKQLTKDA KTLRLNLHLS PDGRYLAHDD
YDGNVWMLDL KKGSNKKIIT QGEGLGPYAD IVWSADSRFI ALTKAEMGKA RPQIVLYSLN
KNRAESLTSD KYESFSPSFS ADGDWLYFLS NRKFVSTPSS PWGDRNLGPM FDKRTQVFAI
ALNDDARFAF QKPNELMSEP QKADDNEVET EVEWGGLSSR LWQVPIAAGN YDSLQMAKDK
FYLLDTSTSG KSTLKVVKFD VLSPKVETFS KDVGEYQLSQ DGEKLFIRKQ SKQGSEMLIV
DAGDKLPKEL NHAKVQTNLW QLAIEPAAEW QQMFEDAWLM HRDSFYDKNM RGLDWQATKA
KYQPLVDRLT DRHELNDLFM QMMGELDSLH SQVRGGDAPK DPSKAKSASL GARLEQTKAG
VVIEHIYQGD PELPAQAAPL MQMGVNAKVG DLIVAINAKK LSNIADVTKL LRNQAGKQVL
LTLKRGSKTH QTIVKPVTAS KNAKLRYVDW VRHNSDEVSE SSDAKIGYLH LYAMGSGDIA
SFAREFYANV DKEGLIIDVR RNRGGNIDSW IIEKLLRRTW AFWAPTHGTP SGNMQQTFRG
QLVVLTDQLT YSDGETFSAG VKALGIAPLI GKQTAGAGVW LSGRNSLTDN GMARVAEYPQ
YAMDGSWIIE GRGVSPDIEV DNLPYATFTG HDAQLEKAIS YLKGALQEQP VHELTPKPMP
TKGMAEDVYK AF