| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1206 |
|---|
| Symbol | |
|---|
| ID | 5661605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 1467001 |
|---|
| End bp | 1468251 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641235768 |
|---|
| Product | sodium:dicarboxylate symporter |
|---|
| Protein accession | YP_001501068 |
|---|
| Protein GI | 157961034 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCAAG CGATTAAAAA CATCCCATTT TGGCAGAAGG TACTAGCAGC CTTTATATTG
GGCGCCGGTG TTGGTGTCAT TTTCGGTGAG TCGGCAACTG TATTAAAGCC ACTTGGCGAT
CTATTTATCA GCGCAATTAA GATGTTAGTT GCGCCACTCA TTTTCTGCGC CATCGTTGTC
AGCATCACCT CTTTAGGCTC TGAAGTCAGT TTAAAAAGAC TGAGCTTTAA AACCTTAGGC
ATGTTCATGC TTACTGGCAC TATAGCCTCT CTCATTGGAT TAACCATTGG TTCTGTGATT
GATATGGGCG GTTCGATGGA GCTGGTTGCT ACTGAGGTTC GTGAACGCAA TGTTCCGGGT
TTTGCTCAAG TTTTATTGGA TATGATCCCG GTTAACCCAT TTGCTTCGCT TGCCGAAGGT
AAGGTGTTAC AGATCATCGT CTTCGCTGCA CTTATCGGTA TTGCGATTAA TAAAGTCGGC
GAAAAAGCAG CCCCGCTAAA GCGTACGATT GAAGCAGGCG CTGAAGTGAT GTTCCAACTT
ACTCGCATGG TACTGCAACT CACCCCAATT GGTGTGTTTG GTTTAATGGC TTGGGTAGTT
GGCGAATACG GCTTATCGAT GTTACTGCCT TTAGGTAAGT TTATTGGTGC TATTTATCTT
GCTGCACTTA TCCATATTAT TTTCGTCTAC GGTGGTTTGG TTAAGTTTGT CGCCAAGCTG
AGTCCAGTAC AATTTTTCCG TAAAGCGATA CCAGCACAAA TAGTGGCTTT CACCACGGCT
TCAAGTTTTG GTACTTTGCC AGCAAGCACA CGTTGCACCG AGTCTATGGG TGTCTCTAAG
CGTTATGGCT CTTTCGTCCT GCCATTAGGT GCCACCATGA ACATGGATGG CTGTGGCGGT
ATTTACCCAG CGATTGCGGC TATTTTCATT GCGCAAATCT ACGGTATTCC ACTTGATATG
ACTGACTATA TGTTGATTGC CGTAACCGCG ACCGTTGCCT CCGTTGGTAC CGCTGGCGTA
CCTGGCAGCG CCATGGTTAT GCTCACAGTC ACCTTGGGCG TTGTTGGTTT GCCACTTGAA
GGCATCGCCT TTATCGCTGC AGTCGATCGC ATTATCGATA TGATCCGCAC CGCCACCAAT
GTCACCGGCG ATATGATGAC CGCTGTGGTG ATTGGTAAGT CTGAAGGCCA GCTGGATGAA
ACGCAGTTTT ACACTCCAGA GAATGGCTCG CTAGAGCAGG CCAAGAGCTA A
|
|---|
| Protein sequence | MWQAIKNIPF WQKVLAAFIL GAGVGVIFGE SATVLKPLGD LFISAIKMLV APLIFCAIVV
SITSLGSEVS LKRLSFKTLG MFMLTGTIAS LIGLTIGSVI DMGGSMELVA TEVRERNVPG
FAQVLLDMIP VNPFASLAEG KVLQIIVFAA LIGIAINKVG EKAAPLKRTI EAGAEVMFQL
TRMVLQLTPI GVFGLMAWVV GEYGLSMLLP LGKFIGAIYL AALIHIIFVY GGLVKFVAKL
SPVQFFRKAI PAQIVAFTTA SSFGTLPAST RCTESMGVSK RYGSFVLPLG ATMNMDGCGG
IYPAIAAIFI AQIYGIPLDM TDYMLIAVTA TVASVGTAGV PGSAMVMLTV TLGVVGLPLE
GIAFIAAVDR IIDMIRTATN VTGDMMTAVV IGKSEGQLDE TQFYTPENGS LEQAKS
|
|---|
| |