| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1203 |
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| Symbol | |
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| ID | 5661602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1464553 |
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| End bp | 1465638 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641235765 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001501065 |
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| Protein GI | 157961031 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACC AATCTAGCAT GTTGTTAGCG ACATTAGCGC TGTTCACCAG CTCGGTATCG
GCGCAGAGTA CTCTTAATAT TTATAACTGG TCAGATTATA TCAGCGAGGC GGCAATAGCC
TCATTTGAAG CCAAAACAGG GATTAAAGTG AATTACGATG TTTATGATTC TCAGGAGCTT
GCTGAAACCA AATTGCTACT GGGTAAAACT GGCTACGACC TAGTGGTGTC ATCAGGTTCA
TTCTTACAGC GGCAGATTAA GGTAGGAGTA TTTCAGCCTT TAGATAAGAG TCGTTTAAAG
AACTATTATC ACCTCGATCC TAAGGTCCTC AATATCGTTC AATCTTTTGA TGAAGATAAT
CAGTATGCGG TTCCGTACAT GTGGGGCACA ACAGGTATTG GTTATAACAT AGATAAGGCG
GCTCAAATAT TAGGAGAGCA GCCCTTAAAT ACATGGGAAC TCCTGTTTCA AGCCGAAACG
GTTTCAAAGT TTAGTGAGTG TGGTGTCGCC ATGGTTGATG CCCCAAGCGA AGTCGTCAGT
GCCATGTTGA AGTATCTAGG CAAAAATCCT AACTCGCAGA ATTTAGACGA TCTAAAGTTG
GTTGAGGAGC GGCTTCTTGC GATACGCCCC TATATTACCT ATTTTCACAG CTCTTCTTAC
GTTACCGACC TTGCAAGTGG CAATATCTGC TTAGCTATGG GCTGGAGTGG TGATGTATTT
ATGGCTGCGA ATAGAGCCCT TGAGGCTAAC AATGGGGTAA ATGTTGACTA TGTGATCCCA
AAAGAGGGCG CACAAGGTTG GGCGGACACG TTTAATATCA CTAATGACTC TAAAAATGTT
GATGCAGCTT ATGCCTTTTT GGACCATATC TTAGAGCCTA AGGTCATCGC TGAGATCTCT
AATTACGTCT GGTATGCCAA TGCCAACGCT GACTCGCAGC AGTATGTCGA TACCGCTATT
ACCTCTCATC CAGGTATTTA TCCGGATGAA AACACCTTGA GTAACTTGTT TGCTGATGAG
GGGCGTAGCT TGAAGTTTGA ACGTGCGATG AATCGTATGT GGACTCGTGT CAAGACGGGC
CAATAA
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| Protein sequence | MNNQSSMLLA TLALFTSSVS AQSTLNIYNW SDYISEAAIA SFEAKTGIKV NYDVYDSQEL
AETKLLLGKT GYDLVVSSGS FLQRQIKVGV FQPLDKSRLK NYYHLDPKVL NIVQSFDEDN
QYAVPYMWGT TGIGYNIDKA AQILGEQPLN TWELLFQAET VSKFSECGVA MVDAPSEVVS
AMLKYLGKNP NSQNLDDLKL VEERLLAIRP YITYFHSSSY VTDLASGNIC LAMGWSGDVF
MAANRALEAN NGVNVDYVIP KEGAQGWADT FNITNDSKNV DAAYAFLDHI LEPKVIAEIS
NYVWYANANA DSQQYVDTAI TSHPGIYPDE NTLSNLFADE GRSLKFERAM NRMWTRVKTG
Q
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